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51-2509-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3386274 [Map]; Strand: c
      • AT5G10720.1 - [+] show detail - histidine kinase 5
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 51-2509-2 - 5-prime edge 
    AATGACATCA GTGATCATAT ATTATAAACG AAAATCTTGC ATTGAGAAAC 
    ATAAAGAAAT TGTAATCATG AAGTCTCGAG ATGCAAAAGG CTGAAACAGA 
    AAGAAATGAA AAAAACGAAA GACAAAGCAG AGGAACGAGT ATGCCGGAGG 
    AAAGGGGAAG GGATCAGAAG CTTTACCTTC TCCGACTCCG GTCACCGGAA 
    AAATGAAGAA GAAGAAGGAG AGAAAGAAGG AGTGAGTAGA TCTGAAGAAG 
    AGTCGTGGTC GTCGGGAGTA GAGTAAATAA ACTTCAAATG AGCATTGGGA 
    AGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3386390 [Map]; Strand: c
      • AT5G10720.1 - [+] show detail - histidine kinase 5
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 51-2509-2 - 3-prime edge 
    ATGTCGAGAA TAAATCACCA AAGATTTTNG GCTTTCCATA TATTTTTNCN 
    GANCATCGCT CAGAAANAAG TTTCATCGGG TTAAATTTAT TTTCANATTT 
    TNTCGTTTAT TGGTGAATTT TANGATCCTA GTTGATAATT CAATCTGAAA 
    AAAGAAACTG ATACAGTTTT CTTTTTGAAG CTCTGCAAAT TTCTGATTTT 
    TAAGCTCGAA TCATATAATT TGAAGTTTCC CGCTAATGTT CAATCAGAAT 
    TGGTCCACAC ACTTAGTTGT TGTGGACCCT TTGCAAAATT CTATTTTAGT 
    TCATTATTTT TCACATTTTA CAGATCAAGA TTCTCTGATG GAGATGGTTT 
    GTCCTGACTC TA

AT5G10720.1

Model type
Protein coding
Short Description
histidine kinase 5
Curator Summary
member of Histidine Kinase
Computational Description
histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink).
Link
InterPro Scan - TAIR