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51-2559-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3521556 [Map]; Strand: w
      • AT5G11080.1 - [+] show detail - Ubiquitin-like superfamily protein
        Distance: -2107; Region: intergenic
      • AT5G11090.1 - [+] show detail - serine-rich protein-related
        Distance: -3124; Region: intergenic
    Flanking Genome Sequence: 51-2559-2 - 5-prime edge 
    ATTTTTGNGT AAATAAGTGT TGTTAAGATG GTTAGTTTCT GGATTGTTTA 
    GATAATACNA AGANTTTTAT TTTTTTTTGT GCGGCGAATA ATACTAAAAT 
    ATTCAAATNT CTCTTTTANT GGATGGTTAT TGATTAACCA AATATACAAA 
    CNNATTTCNA AATGAAAAAA AAAAAATGGC AAATCANCAT AATATCATAA 
    TTATTGAAAT CTGTACATTA TAATATTGGA TGCTANTACA ACATCTCTGC 
    TA

AT5G11080.1

Model type
Protein coding
Short Description
Ubiquitin-like superfamily protein
Computational Description
Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G11090.1

Model type
Protein coding
Short Description
serine-rich protein-related
Computational Description
serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G25280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR