1. Home
  2. Mutant Lines
  3. 51-2591-2

51-2591-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 241287 [Map]; Strand: c
      • AT5G01630.1 - [+] show detail - BRCA2-like B
        Distance: -376; Region: promoter
    Flanking Genome Sequence: 51-2591-2 - 5-prime edge 
    GTTGCAATGT AATTTGCATT GAAGTCAGTC ACCAATCACA TTGAACAGAT 
    GTTTTAAAAT GTCCACGTAA GCAATTATTG TTTGGAACGA TTTCGGGTTA 
    GCATTCGTGC CGTTAGTTAC CGCAATAAAA GGCCGTGGCA ATATCACACT 
    TGTCTTGGAA CGCTATGTCC GTAAAAACCA AGCCCAAAGT TAAAATAAAA 
    CCACGCGTCT CATAATTTCG GCCCAAATCT TTTTCAACTT TCCCGCCTTT 
    GTCAGAACTT TTAACTTTTT GGATTTTTGG TGATNATTTT GGTTTGGGGA 
    A

AT5G01630.1

Model type
Protein coding
Short Description
BRCA2-like B
Curator Summary
Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.
Computational Description
BRCA2-like B (BRCA2B); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: meiosis; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA recombination/repair protein BRCA2, helical domain (InterPro:IPR015252), DNA recombination and repair protein, BRCA2 (InterPro:IPR011370), BRCA2, oligonucleotide/oligosaccharide-binding 1 (InterPro:IPR015187), Breast cancer type 2 susceptibility protein (InterPro:IPR015525), BRCA2 repeat (InterPro:IPR002093); BEST Arabidopsis thaliana protein match is: BREAST CANCER 2 like 2A (TAIR:AT4G00020.1); Has 281 Blast hits to 210 proteins in 91 species: Archae - 0; Bacteria - 4; Metazoa - 134; Fungi - 18; Plants - 61; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR