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Mutant Lines
51-2651-1

51-2651-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 15826201 [Map]; Strand: w
- AT3G44060.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

ATCTCCGGGC GCCCCGAAGA TATCCTAAAG AGTTTCAATG ATTTCGTGGA 
CAGTTCATTA GCTTTTCAAG GTGGTAAACA TATAAAAAAG TTCTCACTTC 
ATACTAAAAC AAAAACATTT GAATATGACG TACTTGACCG CTGGATTTGT 
AATGCCCTGG AACACGGTGT CTCTGAACTT CATCTACACC TAATGCATAA 
ATCGTGGCCG TGGTTGTTTT CTATCCCATC TAAAGTTTTC AACAGCTCAA 
CACTGGTTAA GCTGTCATTG GGATCGAGAC TATACTGCCC AAGTTTTCCT 
CCGGATACAT CTCTCCCAGC ACTAAAGGTT CTGCTCCTTG ATTCAATCTT 
GTTTCGGGAT GATCAATTAT CTAATGTGTT TCTCGCTGCA TGCCCTGCAC 
TTGAGGA

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23429286 [Map]; Strand: c
  - AT3G63450.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -422; Region: promoter
  - AT3G63450.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -422; Region: promoter
  - AT3G63450.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
    Distance: -132; Region: promoter
Flanking Genome Sequence: 51-2651-1 - 5-prime edge
```
GAAANNATAT ATTCTAGAAT CATATGGGTA CTAAAATANA TNAGANAGAG 
AGTGTGTGTG TGTGTTTTGT TGTGAATTTG ATTGCAAAAA TCCAAAGTTT 
GACGCTTTGA CCCACTCACT TGGGAGTTGG AGCCCAGAAN ACACAACAGT 
CACTCCACTC TTCTTTAACT
```

AT3G44060.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G44090.1); Has 1848 Blast hits to 1806 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1848; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63450.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2); Has 366 Blast hits to 230 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63450.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63450.3

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2).
Link: InterPro Scan - TAIR