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52-0054-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 174585 [Map]; Strand: c
      • AT2G01400.1 - [+] show detail - unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; B...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 52-0054-1 - 5-prime edge 
    CATAAATCTG TCAGACCATA CAAATGAAAA GATTATCTGC ACAAGTTTAG 
    GCTTAAAAAG GAATCAAAAT CTCAACAGCT GANTCTCTGA GAAAGCAATC 
    TCTAATAGCT CAATCTAAAC TTAAAAGGCT ACGAATTCAT TGACACACAT 
    AGCACAACAT ATTTCTCCAC GAAAAGAAAA CTAACTATAT GGATCTTCGA 
    AAGCTGTTGT ACTTGTACGA ACCTGAGGAG ATCCTATACT TGTGGCTAAA 
    ATCACCCGGC GCCGTGAAAT TTTAGGTGAT TCTCCGGTCA CAGGTGAAAG 
    TGAGATCAAA ACAGGTGTCC AGATAGAGCA CGATCTCGCC ATCTCTCTTC 
    TCCGGCGTCA GTAGCAACCG CTAATCTATC AGAAATGTCT AT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 174701 [Map]; Strand: c
      • AT2G01400.1 - [+] show detail - unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; B...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 52-0054-1 - 3-prime edge 
    GATTTATGAT TGCTTGGTCA ATAGAAGAAG AAGATTAATA TTGAGTCTGC 
    ATTGGTTTTG TTAGTTAGTG TATATCTCTG AAGTCAGTCT CTTATGCCTT 
    GTCTTTGGCA GCCTTTACTT GAAGCAAAGA TCAAGGAACC TCAGAAGCTT 
    CAAGTCCTTG ATTCCAAAGA TGTTTCCAGA AGAAACACTA TGCTGTATCT 
    AGCTGCTGGA TTTCTTGGAG GGATCAACAT TCTCAATAGT GAAGCCGCAG 
    AAGCTCGAGT AGGGAGAAAG GAGAACAGAA AGAAAGCATT GGAGAAGCTG 
    AGGGCCAAAG CTAAAGAGTC AGAGCCCAAC AACAAGTCAG GTNNCCNAAA 
    GATAGAGAAA GAGTTNGAGA AAGAAGAAGT GTTTCCTCTA CTTCCTCCAC 
    CTCTTGTCGT TGAAGCAAAC TTGCTACAAT AAGCTCTCTC TCTCTTTTAG 
    CTACACAAAT GTCAGAATCA ATACCTTTCA TTTCAACACT ACATGCTGTT 
    CTATGCT

AT2G01400.1

Model type
Protein coding
Computational Description
unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR