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52-0062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 69818 [Map]; Strand: c
      • AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
      • AT4G00165.2 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0062-1 - 3-prime edge 
    AAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTGC 
    CCATTAGGTT TATCTTGAAA CTAGTGCTAT GTGATACCTA TGAGGAAGAA 
    GAGAGGCCTT AACAATTTGC GTTCTTTCTT TGTTGGTGCC TTTATCATTG 
    GGGCTTTGTG GACATAATTG TTTGTGTTAT CCCTAGTTCT GTAAAACGTA 
    TTTGTCTTCT TCTATACTTT GGAAAATCTT TTCCGATCAC TCAAAAATAC 
    AGTTGTTGCT GTTCGAAAAC GACACATTCA TATAATATCT GATAGACTTT 
    TATAGATGGC GAGATTTAAG GAGTTGACCC TTGGAGAAAA AGTTTAACTT 
    TTCCCTTGAG GAAATAAATG AACTTGTAAA CAAACCCCTT GGAGAAGAAG 
    TAAAAGATAA ACATAGACGT GGCTCTATAT ATTAGAGAAA CCCACCCAGT 
    GGCTTAGGCT AATCTAATCT GGTGTTGAAA ATGGGGTTTA TAAGAAGCTA 
    CTTCTCATTC GTCTGCGGAA CCATCTGGGG GATATATATA GCGCAGAGCT 
    ACAACGTTCC AAACATAGAA AAGGTGGCTC AAGCAGCTTA TTCCATGGGC 
    ATGCAGATGG AAGAAAGATA TCGAAAGACA AAGACCAAGC CCAAAGAAGA 
    CTTCCAAGAC TAAAACATGT AACTGGTTTC TTTCTACTTT GTATGATGCG 
    TTTGTTTTCT TAATCAATCT GATTTAATTC CAATCATAAG AACGACTCTT 
    GAGATCTTAC TACAGACTCG AAAGTGTGTT TAATC

AT4G00165.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00165.2

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 761 Blast hits to 755 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 761; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR