1. Home
  2. Mutant Lines
  3. 52-0078-1

52-0078-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 120652 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0078-1 - 5-prime edge 
    CTTTTCACTT ACTGCTACTC AAAGTTCTGC GCTTGTAACC GCGAGAACCA 
    GTTCGGAGTC GAGAAAGAAT CCAAGAAAAG GGCTTCTGAG TGTCTGTGTT 
    TCCGTAAAGA CGAATCCGAA ACGCCATCTG AAAACGTGGA GCATTGCGAC 
    ATTGTTCCCC TCGACGCTCA GGTTGCGTTT AACCTGGAGG AGCTGCTAAA 
    GGCGTCAGCT TTCGTTCTGG GGAAGAGCGG AATCGGCATT GTCTACAAAG 
    TGGTTCTAGA GAACGGGCTC ACACTGGCCG TACGGAGATT GGGTGAAGGA 
    GGGTCTCAGA GATTCAAGGA GTTTCAGACA GAAGTTGAAG CCATAGGGAA 
    ACTAAAACAT CCTAACATTG CTAGTCTTCG AGCTTATTAT TGGTCTGTCG 
    ATGAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 120768 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0078-1 - 3-prime edge 
    GTGAAAAGCA AACCCACAAG GCAGATACCA AACACGTCGC AGAGAACAAT 
    GGCAATGACG GCGCTTTTGC TCAAACCACT TGATTTCTGT TTGGTTTCAG 
    AGTTAGTACT ATCAGAATCC TCAGGTGGGT TGTTGCTTGG GATAAAAGGG 
    TAAGAGGCAT TGAGGCCAAG TTGATATCCT TGGCAAAGGT CCTTCAATGG 
    AGGCCCGCAT AGACCAGTGT TGCCGATAAA CGCCGTTGGT CCTCTGTTCA 
    TAAGAGCACC GGTTTGAGGA ATGGGACCGG AGAGATTGTT GAAAGTGAGA 
    TCAATGTAAA CCTTTTCAGG AAGATCTCCA AGGGCAGGTG GGATTGAGCC 
    GGTGAATTGA TTATGAGAGA AATCAGCAGT TCCTTGAAGG TTGGAGAGGT 
    TTCCAATGTC GCTGGGGATG GAGCCGTTGA ATTGGTTGAA GGCGAGGTCG 
    AGTTTCTCCA GAGAGACGAA CGCTGAGCCA AACCCATCAG GCAAAGGACC 
    AGACAAGTTG TTTCTGCTGA CATCGAGTGT TTTAAGTCTG TTGCATTGCA 
    GAATCGAAAG TGGTAACGAC CCGTTGAAGA GATTCTGTGA CAAATCTAAG 
    GTCTGAAGAA GCT

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR