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Mutant Lines
52-0082-1

52-0082-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 9935589 [Map]; Strand: w
  - AT1G28330.1 - [+] show detail - dormancy-associated protein-like 1
    Distance: -320; Region: promoter
  - AT1G28330.2 - [+] show detail - dormancy-associated protein-like 1
    Distance: -323; Region: promoter
  - AT1G28330.3 - [+] show detail - dormancy-associated protein-like 1
    Distance: -325; Region: promoter
  - AT1G28330.5 - [+] show detail - dormancy-associated protein-like 1
    Distance: -318; Region: promoter
  - AT1G28330.4 - [+] show detail - dormancy-associated protein-like 1
    Distance: -323; Region: promoter
Flanking Genome Sequence: 52-0082-1 - 5-prime edge
```
CCTTTATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
TTTCCCATCC TACTTTGAGG GTGTGCAAAT AAAAAAAAGT GCTAGATGGA 
ATGTGACACA AATCTAGATA AGGATGATGA GTCATTGAAG TGGGACCTAT 
AAAATAAAGT ATTCTAGCCT CGAGCTTCGT GAAATTATCA CAAGGTAACA 
AATTGGTAAT TATTGAAATA TCGTCAAATT CAGAATACCT AATTTCTTCT 
TAACCATATG TAGAATTTTA TGTGAAGCCT AAGTATCATG ACAAACTCTT 
AGAATT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 9935534 [Map]; Strand: w
  - AT1G28330.1 - [+] show detail - dormancy-associated protein-like 1
    Distance: -265; Region: promoter
  - AT1G28330.2 - [+] show detail - dormancy-associated protein-like 1
    Distance: -268; Region: promoter
  - AT1G28330.3 - [+] show detail - dormancy-associated protein-like 1
    Distance: -270; Region: promoter
  - AT1G28330.5 - [+] show detail - dormancy-associated protein-like 1
    Distance: -263; Region: promoter
  - AT1G28330.4 - [+] show detail - dormancy-associated protein-like 1
    Distance: -268; Region: promoter
Flanking Genome Sequence: 52-0082-1 - 3-prime edge
```
CTCCCCACTC CTTTTCTTTT GTGATCCTAA AATTAAGTTC AAAATTTATT 
TTAATTTTGG AATCTTCAGA TTATAAGAAG AAAAAAAACA TTGAATCTTA 
CATAAATACC TTAAGTAGAT TTGGGATTAC CGGATTAGTA GTGACAAAAT 
TAACTAAGAA ATATTATTCA ATAATAAAAC AACCAGTAAA ATAAAGTCAC 
CAAACTTTTT AAATGGCGTG GCCGGTAGTG AAAAAACAAG AAAAAAATTA 
ATAATGTAAA TAAAAATCAA GATATTTTGA TAAGGTGTCT ATAAAAGTCA 
TATGCCACCA CCAAAAGTGT TTCACTGTCT ACAAAATCAT TGAAGATCTA 
CCCAAAAAAA AAAAAAAAAA ANGGGTTTNN TNAAAAAANT TCCNNCCCGG 
GNCNGNANCC CCCCNNGNCC CTTNNA
```

AT1G28330.1

Model type: Protein coding
Short Description: dormancy-associated protein-like 1
Curator Summary: dormancy-associated protein (DRM1)
Computational Description: dormancy-associated protein-like 1 (DYL1); CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28330.2

Model type: Protein coding
Short Description: dormancy-associated protein-like 1
Curator Summary: dormancy-associated protein (DRM1)
Computational Description: dormancy-associated protein-like 1 (DYL1); CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28330.3

Model type: Protein coding
Short Description: dormancy-associated protein-like 1
Curator Summary: dormancy-associated protein (DRM1)
Computational Description: dormancy-associated protein-like 1 (DYL1); CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28330.4

Model type: Protein coding
Short Description: dormancy-associated protein-like 1
Curator Summary: dormancy-associated protein (DRM1)
Computational Description: dormancy-associated protein-like 1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2); Has 226 Blast hits to 226 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28330.5

Model type: Protein coding
Short Description: dormancy-associated protein-like 1
Curator Summary: dormancy-associated protein (DRM1)
Computational Description: dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2).
Link: InterPro Scan - TAIR