1. Home
  2. Mutant Lines
  3. 52-0083-1

52-0083-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3299096 [Map]; Strand: w
      • AT3G10550.1 - [+] show detail - Myotubularin-like phosphatases II superfamily
        Distance: -574; Region: promoter
      • AT3G10560.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: -797; Region: promoter
    Flanking Genome Sequence: 52-0083-1 - 5-prime edge 
    CCTGCAACAC TCTGTCGGTT CAGAAAAATT CCGCAATCGT TTCCCCCTTG 
    ATTTATAATA GTATATTTCT CATTAGTTTT TACCTAAAAA ATAATAATTT 
    CAGCATATTA AAATTAATCA CCTAAACCCC GGAATACCTT GAAAATAGAA 
    AATACATGAC TAAAAAAAAA NGTAAAAGAA AAAAAANGCC CNCCCTANTT 
    TTNGCCCCNT TTCCNGGGGC TNTTCNAANG NCCGTNCCTN AATNCNTNNG 
    TCCCNCTTNA NTCCAAAANA NNNGTGGGNC CTAATTNGNA AAATTNTANC 
    CNCTTTAAAN CCTANCTAAG NNAATNTTNT NTANCNCATA GNANGTNGCC 
    TCCTTTTNCC NCTTAAAAAA CNCTNCANCN NGTTNTNNGT TTTNANCCNT 
    NGNANCTNGT TNTCCTNTCN ANCNGATNGG CCAAATNAGN TTTTNAAGCA 
    ATNAATNTNG NGGGGTTTTN GCNGNANCTT NTAAAAAACG TTNCCNTNTA 
    AGGCNGANCC CNTTNTNAAT TNCCNTNAAA TNNTNTAACG TNTAACNGTT 
    TNTAAGNAAG GATTTTATAC NCCATATAAN ANATAACCGA TNGCTATAAC 
    ATGCTGTATA CNCGTCTAAT ATGATTNTTN TNCCTGTAAA TAAANGAAAC 
    TNTTTCNCAA ATANAAANGG TAAGCAATAT TGCGAAGGCG TTAAAAAGAT 
    ATTTTTCCGA ANAAATGGGA AAACAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3298980 [Map]; Strand: w
      • AT3G10550.1 - [+] show detail - Myotubularin-like phosphatases II superfamily
        Distance: -458; Region: promoter
      • AT3G10560.1 - [+] show detail - Cytochrome P450 superfamily protein
        Distance: -913; Region: promoter
    Flanking Genome Sequence: 52-0083-1 - 3-prime edge 
    GTTGCAGGTA ATTTTGGTCT TTTATAAATT CAACTTGGAT AATTCAGGTG 
    ACATGGCTTT GAAGATTATT GATGTTGATG TTTAATACAA TTCAAATTGT 
    TGATAAACAC CTGTGGATTA TTTAGTAGTT TGTGACCTTT TTGTTGTTAA 
    GACGGTGACA TATAATTGTG CACAACTAGA GATAAGTTCT TCTACCGTCC 
    AAAATTTAAC TTTATATAAG AAAAACATTT CGTACATTAT ATCTAATACG 
    AAAAACAGTA TTTTGAATAA TTTAACTTTA GTTAAATTTC TAAATTAGCG 
    TTAAGATAAA GAATTATTAT GGAAAAATAT TTTGGTAAAT ATTTTGATTG 
    ACCTCAGATT ATTTTGCCTT GATTTTTTTT TTTTTGGGNG NCCGTNAANN 
    CCAANTNNNN NCCCNTANCC AAANNAAGNC CCAANGGGAA AAAACCNNNN 
    NTTTTTNCCN AANCNAAAAN NGGGNCNTTT NANTNNNNGG GGGGGGNAAA 
    NNAAACCCCC NTTTTNCCCC CNTNNNNNGG GGGGGNNNCC CNAAAACCCT 
    NNNNCCNGTT TTTTTTTTCC CCCCTTTTTT NNNNNCCCCC CCAAANCCCC 
    CNTTGGGNCA ANAAAGGCCC CTGNNTAATN TTTTTNGGAA TCAAAAAAAA 
    AGGNGGGNCC CCGGTTTTNG GAACCCCCTN GATNGGCCCA ACCCCNNNGG 
    NANTNGGCNN NAAATTTNTN CCGGATNNCC CCTTTTNCCC CTTTAAC

AT3G10550.1

Model type
Protein coding
Short Description
Myotubularin-like phosphatases II superfamily
Curator Summary
Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.
Computational Description
Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10560.1

Model type
Protein coding
Short Description
Cytochrome P450 superfamily protein
Curator Summary
member of CYP77A
Computational Description
UNFERTILIZED EMBRYO SAC 9 (UNE9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 33598 Blast hits to 33350 proteins in 1733 species: Archae - 49; Bacteria - 4240; Metazoa - 11965; Fungi - 6662; Plants - 9437; Viruses - 6; Other Eukaryotes - 1239 (source: NCBI BLink).
Link
InterPro Scan - TAIR