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Mutant Lines
52-0110-1

52-0110-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 172665 [Map]; Strand: c
  - AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 52-0110-1 - 5-prime edge
```
TATAAGTCAC CGTATCGATC AACACACCCT TCTCCTTCAT AAGGTGAAAA 
ACAGAGTACA TGGATTGAAT CCGACCGGCT TCTCCGAAGA TATCGAGCAT 
GGTGGTATAA GTGAAGTGGT CGTGTTTGAA ACCCTTGATT TGAGCAGCCC 
AGTTGAAAAA GAGCCAAGCT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 172781 [Map]; Strand: c
- AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

GACTTATACA TCGCTGATTC ACTGGGTTTC AAGCTCCGGT GATGTGGATG 
GAGCAATGAG GTTGTGGGAG GAGATGAGAG ATAATGGGTG CGAACCTACC 
GTTGTGTCGT ACACTGCTTA CATGAAGATG CTTTTCGCTG ATGGGAGGGT 
GGAAGAAGCC ACGGAGGTGT ATAAGGAGAT GTTACGGTCG CGGGTTTCTC 
CGAATTGTCA CACTTATACN TGTATTGATG GAGTATCTTG TCGCCACAGG 
TCAGCTTCAT TCTCTTGCAC ACCAAGTGTT TGTTAAAATG TCTAGCTGAA 
AGTCCACAAC GTTTGCTTTA TGTAGATGAA TCTGGTATCT GAATGTTTTG 
TAGCCTTGTT GGTGATGATG TGTTAGGTTC TTCGTTTGAT TTTGCAGGAA 
AATGTGAGGA AGCCTTAGAC ATATTCTTTA AAATGCAAGA AATTGGTGTG 
CAGCCAGATA AAGCAGCTTG CAATATTCTG ATAGCGAAAG CT

AT2G01390.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR