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52-0111-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11890870 [Map]; Strand: c
      • AT4G22580.1 - [+] show detail - Exostosin family protein
        Distance: -145; Region: promoter
    Flanking Genome Sequence: 52-0111-1 - 5-prime edge 
    TCTCTAGTCA CTAGATATCA AAATCAACTT TTATGTTTTT AGCCAAGAAG 
    AGATCCAACG TTCAGTTATT GCCTCAAATT CACCAATTTT GACTCTTTAA 
    CAGGGTTTGT ATTCCTATTA ATAAATAATA AAGGCAACAT TAAAATATAC 
    ATATACATTT AAGGATCTAT TTGCAATTAC CAAAAACTTT CCTACCATTA 
    ATAAACAGAG AGAAAAAAAA CTACCACTCT CACTCCGACA ACATCCATAA 
    CAATGGCTTC CAAATCCACC GTCACAACAT TGACCATCTT CTTCTTCTTC 
    TTCTTCTTCA TCGAGCCTAA GGTTCAGTCT CAGCAAATCT CAGCCGTTGA 
    TTCAGAATGC ACCAACCGTT GGATTCACAT CCGAACACTC CCATCACGAT 
    TCAATCTCGA TCTTCTCTCA ACTTGTAATC GTTACCCAAT CACCGACGAT 
    CTTTGCCCTT ACTTAGCCAA TCACGGACTC GGCCCAAAAA CCCATACCCG 
    TACCCGAAGC TGGTATCGAA CTGACCCGTT ACTTCTCGAA CTCATTTTCC 
    ACCGTCGGAT TCTCGAATAT CCATGTCTCA CACCCGACCC GAATCTCGCC 
    TCCGCAATCT ACCTCCCTTA CTACGCCGGC ATCGATTCTC TCCGTTATCT 
    CTACGGACCC GATTTAAACT CAAGCGCTGA TCACNGGGTC GGATCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11890986 [Map]; Strand: c
      • AT4G22580.1 - [+] show detail - Exostosin family protein
        Distance: -261; Region: promoter
    Flanking Genome Sequence: 52-0111-1 - 3-prime edge 
    ACTAGAGAGG AGAATCTANC GGTGCTTGTG CAATTTTGAA CACAATAAAG 
    TCGGTGATCG TGTGAGTGTA CTCGTGGACG CGGGGAAGAT CAATCCCATT 
    TTCCATTTGT GTGTTCAATA ATTAGTTTTC CAATTCTAAA ATAAGAAAAC 
    AAATTATAAA AGGACATTGG GTTTAAACNT GGTATGGCTC TTTTATTTCA 
    CTTAACCGAA TTGAATTTAC GAAAGATATG GTTTTGGTTT CCACTAACTA 
    AACCGATTTC ATTATAAGGC CTTCTCTCCA AAAGACAGAG AAAAGATAAA 
    ACACTGATTT ATGAAGACGG ACTGGGTAGA AAAAGCTCAT ATTTAGCAAA 
    GCAAAAAAAT GGAAAATCCC GAGCTTCGGT CCATTATACA TAAAACTTTT 
    GTTAGAGATT TATCAAATAT TTATTTACTG CCGTCATGGA GAAGAACATA 
    AACCCTAATA CATGGTCGGA GCTTCTTCTA GACCACCGAT GTTAGCTTTT 
    GTAGAAACTA AAAAAAAGGG TCGGGGAAAA CTCTTTATTA TTGTGTTCTT 
    GATTTCAATA GTAGTAATAC AATATATATA GAAGCTAATT TAGATTTAAT 
    CTAATTAGAA ATGGAAATAG ATAAATATGA ATAAGTAAAT ATTCTAAATC 
    TTTTAATCAT TATCGTAATA GGATATCTAA AATATTTTTT TGATATTGGT 
    TTACGGGCT

AT4G22580.1

Model type
Protein coding
Short Description
Exostosin family protein
Computational Description
Exostosin family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT4G13990.1); Has 709 Blast hits to 706 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 670; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR