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52-0115-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21697525 [Map]; Strand: w
      • AT3G58650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 52-0115-1 - 5-prime edge 
    AAAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
    ATCCTACTTT CATTTTAAAG AATCACCACC TATCACATTG AACCTTATAG 
    CAGAGTCTGC ATCTTGTTTG GTTCCTTGTG AATGAGGAGA TGATAAACCT 
    TTGATCGAAG ATGAGAAAGT GAAAGATATC ACATCCATGT CCCTTTTCTG 
    ATCATCTTTA CTAGTACTCG AGTCGCCATC AATGGAAATG TTACATTTTA 
    TCGACTTTTC ACCCCTTTTG ATCCGCTTAT CTTCATAAAT TCCAGATTCT 
    TGCACTCCAT TCCGCGGTTT TTTGCTTCGA GGAAGACTCT TTTTGCGGGA 
    TAAAGGTAAA GAAGTGGGTT TTTCTGCTGA TGACATAGTA AATCCTGAGC 
    TCTTCGATAT AGATCCACTT TCCACAAGAA CCTTATTTAC TACTTTGTTC 
    ATTACTCTCC TGGATTGCTG ATTGTCTCTG CAGTTCTGCT TCTGGTTGTT 
    TTGCCTAAGC ACATTCTTTC CGGTACTCAA GGAAGATCCT TTGCTACTGT 
    TTTGGCTTTT AACCGCCCTA TTCTTAGCTT CCACTTTCTC CTTTTGTCCC 
    GAAGACATCC TCTTGTTGCC ACTTGAAGAC ATTGATAAGC TGTCTTGCTT 
    CTGATTACTG CTGACTTTTG CTTGCGCAGC GAAAGAAGGT GGCTTCACTT 
    CACCACCTTT CAAAGCATCA TAACTGTTTT TCCCCAATAC TGNAGTTTTC 
    TTCTCGTTTT GATCTCCTCT TAAGTACCTA CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21697514 [Map]; Strand: w
      • AT3G58650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 52-0115-1 - 3-prime edge 
    TTTAAAACGG NNGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAA 
    TGCGCTTTTG GAGCAGAAGC TCAGGGAATT GACAACGAAG ATTGAATCAT 
    CTAGCTCTAG CTTGATCCAA GAAGAGCCCT TGAGTTCCAT TTCAAAAGAT 
    AGAGCGAATG CGATGATTTC ATCGCCTTCC AAATATAGCG GATTGACTCA 
    AAGCAGTCTT GATAGAGTTT TAACAGAGAG TGAATCTGTT TCTGACTGCA 
    CTTCATTCTT TAACAGCCAG AAAGTCCAGG TTAGTTTCCA TAAACTATAG 
    CTTCACTATT CTATAATATC GAATGCTTTT CCGGCTTACC AGTCTCTGAG 
    AAAATCTTGT CTTTTTCCTT TTAGAAGCAG AAGGTAATAC AGGGAGAAGA 
    ACAAGAAGTT AGCAGCATCA CCACTCTTAC AGAAGCTGAT GATTTTGCAC 
    TCTCCTGCAG CAAGAGTATC TCAGATTGCA GACATGACAG AGAATATGGT 
    ATGTCTTTGT GAATTTATGT CTAGATTTTC TTCACCAGGA TTTGAATT

AT3G58650.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2350 Blast hits to 1412 proteins in 248 species: Archae - 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants - 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink).
Link
InterPro Scan - TAIR