Home
Mutant Lines
52-0120-1

52-0120-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 8389228 [Map]; Strand: c
- AT5G24540.1 - [+] show detail - beta glucosidase 31
  Distance: -1201; Region: intergenic
- AT5G24550.1 - [+] show detail - beta glucosidase 32
  Distance: 2831; Region: intergenic

GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCAAA TGAGTATAAT AGACTTAAGA CTGACGTCCT 
CTTTTACACA TCATCTTTAC CTGTTCTTTC TCTTTTTTTT TTTNGGNTCC 
CCCNNNNGGN AAAAANGGTN ANCCNTTNTT TTNNCCCGNA CCCNNGGGNA 
AAAAAAAANT TTNANCCTNG NNNTTTTTNN NNAAANGGNA NTNTNCCCCC 
NAATNCCCCA AAAAAAAANN TTTTTTTTTN GGNANNNTTT GGGGNAANTT 
NGGNAANNTG GGGNNAACNT TTNNAAAANN NTTTNGGTNN NTTTTTTAAA 
ANNAACCCCC NAAAATTTNG GGGGGNAAAN NNNNCNTTTT TTNNAAANNA 
AAANNNNGGN ANGNANTNNN TTTTAAANNN TAANNAAANN GGGNGGGNNT 
TTNAAAAACC CTTNAAAAAA ACNNNTTNNT TTTAAAGGTC CCCCCNNNAN 
NTTTTTTTTT NAANNNCCAG GGAANNNAAA NTTTTTTTNG GNNGGGGGAA 
NTAAAAAAAA ANNTTTTNTN NNNCNNTTTN NTNNGGGGNA AAAAGGGGGT 
CCCNTTTAAA AAGGGNAAAN NAAGGGGGTT AAGGGAGGGN NGGGCCCCCT 
GGGGCCTTGN ACCTNNGNAA CCCCNTTNNT AACCAAAATN GGNGCCCCNA 
AANAGGGGAN CTTTTTNTTN TNNGNANNAA NNNNGGGGCN TNAGGNAANT 
TNAANNNNNN NNTTNANNNT TTNNAAAANN AAA

3 prime edge [+] show sequence

Chromosome: 5; Position: 8389242 [Map]; Strand: c
- AT5G24540.1 - [+] show detail - beta glucosidase 31
  Distance: -1215; Region: intergenic
- AT5G24550.1 - [+] show detail - beta glucosidase 32
  Distance: 2817; Region: intergenic

AAAACGGTNG AGGTATTTTA CNGACCGTTA CCGACCGTTT TCATCCTGTG 
ACCATCTATG CATTACATGG TCATTGGGTC AATTGTAGTT TCTTATGATT 
AAATGGGAAT TTGGTAAGTT TCTGTTAGTA AATGACAGAT AGCTAAAAAA 
CAAAAAAAAA GGTTTAAATT AAAGACGCCA TTTTAATTTT AATTTTTTTA 
ATCATTTGAT ATGCTAAATA GTAAAGTGGA ATTAAAATGA AATTGCGTGT 
TTAAATCATA TGATAAAATT GTCCAAACTA TTTTATTTGA ATTTATGATT 
GGTCACTAGC TAAGATTTGT TTTACAAATT ACCATATTTT AAATTTCTAC 
ATTTTTTTTT GCCATAATGA TTTAAAAATT TCNAAGGACT TGAANACTTT 
AATCAAAATT AANCTAACTG TAAGTCATTA TGTTTCTCGT TTCCATGGGT 
AAATATTGAT GCCAATCGAT NCATAANAGT TCCATGTAAA TCGTATNTTA 
CCAGCGTTAA TNTTGATGCA TATACAGTAT ACACGGTCGT CAAAAAAGGT 
ACAATANACA GTCAATAATA AGTAATCATT TTTGGATATA NATAATTGNG 
GGCACAAGTN TCCCACTTTC CATGCAAGGT CGTCCAGTAA AATAGTCATT 
AGTCAATCTC TATTATGCTG GGTTGACGGC NCATTTTAAA TTTTTAATAC 
TGAAAATATT TTCTTTTATG AANACTTTTT TNTCTGTCAA AAAAAACATT 
TTACCTCATG GGNTCTGGAA TCAAACCTGG AAGATCTTA

AT5G24540.1

Model type: Protein coding
Short Description: beta glucosidase 31
Computational Description: beta glucosidase 31 (BGLU31); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 32 (TAIR:AT5G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G24550.1

Model type: Protein coding
Short Description: beta glucosidase 32
Computational Description: beta glucosidase 32 (BGLU32); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 31 (TAIR:AT5G24540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR