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Mutant Lines
52-0130-1

52-0130-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 193399 [Map]; Strand: w
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -3030; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 302; Region: intergenic

GTTANAAACT AACAAAATCG GTTATACGAT AAGGCACGAG CAGTGTCAAT 
GAGATGTGGA ACAAGTTGCC AACACTACAA GTTTCAATAT GGAAGAGAAA 
GAACAAAGGA GGAGACAAGG AGGTTAGTGG GTCCACTGTT TGATGATTGG 
GTAGGAAACA TTTAGTGGGC CACCACTTGT CTCTTTGTCC CTCCCATCGT 
GAATCAATCT CCTCATTGGT TGCTACACAA AAAAAGAAAC TCCTGTGGGT 
CGGTCACTCG CCATTCCTTA TTCCTCTATT ACCACTTTCT ATATTACTTC 
ACACTCCACA AAACTCTTCT ATAAACTTAG TAAGAAGCAT AAAGCTACCA 
CTAATTTTTC TGCTTTTGTA GATCCCATTA GTTCACGTCC TATTCAAAGG 
CATCAATGCC AAGTCATACA TGAATGGGTC TCTTGTTGGA CATAAAACTT 
AAAGCGTAGA CGACACCAAA CATGTTGGAT CTATGCTATT ATGGCCACAT 
AGGCTTCACC TGATGAATTT GAACACCAAA AGACTATACT ACTACTACAA 
CATGTCATAG TACCAAAATA CTTAACGGAC ATACCAAGTA TGTACTATGT 
ACATTGGCCT GTGCAACCTT TCTTAGTCGC CCAGAAGACA AAGTGGCTGT 
CTCATGCTAA GCTCAGCTTT CAGCGCTGGA AACTTCTCCA GGTCATGAGA 
ATCTCCTAAA ACGTTCTGTG CAACACAAGA TCAAAATAAA TCCAGAGACG 
TAGATATATA TCAATTCACT GTAATGTCAT GGGAGAATGA ATGN

3 prime edge [+] show sequence

Chromosome: 2; Position: 193336 [Map]; Strand: w
- AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
  Distance: -2967; Region: intergenic
- AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
  Distance: 365; Region: intergenic

NTTTAAAACG GTNGAGGTAT TTTACTGACC GTTACCGACC GTTTTCATCT 
AGAGATTTTG TTAATAACAC TCCATTGTAG CTAAATCTAG AGATTGTATC 
GAGTTTATCA GGGATCAAAC ATATATTTGT ATAATCAAAG ATCATGTTTG 
AGATTGAACC ATATACAAAA TATTCACATG TTTTTGGTGT CTTTTTGTTA 
TTATATGTAT AATAATTGGT GTTGGTCGGC AAATATTTTG ATATATACAC 
ATACATGAGA AACTAGCATG GGAGGTGGGT TGATAAAGAC AATCATGAAA 
AGACAATTCT CATGTTTAAT TTGAACACTA CAAGACCAAA AGTTATCTAT 
CACACATAAC TATGCCGGCT TTTAATCCCT GTTTTGTTAA CTACTATAGT 
TTAAGAATCC CTTAATTGAA ACCTGCTTAT GAGTAGCAAA AGAAGATGAA 
ATAGGTAACA AGAGGTTTGG ATC

AT2G01430.1

Model type: Protein coding
Short Description: homeobox-leucine zipper protein 17
Computational Description: homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01440.1

Model type: Protein coding
Short Description: DEAD/DEAH box RNA helicase family protein
Computational Description: DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR