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52-0137-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17337620 [Map]; Strand: w
      • AT4G36790.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 52-0137-1 - 5-prime edge 
    GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATAATT CCTACAAAAA ACACTTTGAA CATCCATTGT 
    TTGTCAAGAA CTGAGATCTT CAGTGTAAAC AGTCTTTTTT TTTNGTTNGT 
    TTNAGGCTTC AANNATANCC AAACNGCANC TTTTGCTNGG GGTNTTNGCT 
    NCAGGAGGAN CNATNGGANC NTTANNGGGA GGGATAATAN CGGNTAAAAN 
    GTCNGGGNTN TNTCCAAATN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17289930 [Map]; Strand: w
      • AT4G36670.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -340; Region: promoter
    Flanking Genome Sequence: 52-0137-1 - 3-prime edge 
    NTTTAAAACG GTNGAGGTAT TTTACNGACC GTTACCGACC GTTTTCATCT 
    ACACATACGT TCTTATCCAA AATCCAAAGT TAACTTATTA ACGACTAATG 
    CCAACTCAGG TTTACACATG ACATCAGAGC TTCCAAGTTT ATAGTCTGGT 
    CAAGCTGTAA CTGTTAACTT TTAATTACAG TCAAGGTCTG TAATTAGAAT 
    TTGATCACAA AACATATTTC ATTCTATAAA TATATATTAA AACGATGTGG 
    ATGACTCTTG TCCATTGGAT TCAAATAACT AAATCATCTC TTAACAGTAG 
    CTTGTGGCTT TCACGACTAC TGTTTTGTCA ACTATTTTTT TTCTATATAA 
    TCACCGAATC TTTTCTTTGG TACTGAGAGA GCAAGAGAGA TTAGTAAGAC 
    CTAACTCTTA ACGAACTTTT AGATAAAAGC T

AT4G36670.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18480.1); Has 44203 Blast hits to 43606 proteins in 2595 species: Archae - 767; Bacteria - 24504; Metazoa - 5461; Fungi - 8681; Plants - 2771; Viruses - 2; Other Eukaryotes - 2017 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36790.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18590.1); Has 13584 Blast hits to 13542 proteins in 1941 species: Archae - 325; Bacteria - 10929; Metazoa - 520; Fungi - 516; Plants - 316; Viruses - 4; Other Eukaryotes - 974 (source: NCBI BLink).
Link
InterPro Scan - TAIR