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52-0154-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8093167 [Map]; Strand: c
      • AT5G23960.1 - [+] show detail - terpene synthase 21
        Distance: 0; Region: exon2 (CDS)
      • AT5G23960.2 - [+] show detail - terpene synthase 21
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0154-2 - 3-prime edge 
    NCTTTGACTA TATNTTCCAT TGCGATATAG GGAACTGAGA CATTCAAANA 
    GAANCATAGT ACGCTNAAGG AGGCGGTGAA GGAAGCTTTT ATGTCTTCCG 
    GAGCGAATCC GATAGAGAAC ATCAAATTCA TCGATGCTCT ATGTCGCCTT 
    GGTGTCTCCT ATCACTTTNA GAAAGATATC GTAGAACAAT TGGATAAGTC 
    ATTTGATTGT CTTGATTTTC CTCAGATGGT AAGACNAGAG GGATGCGATT 
    TGTNCACGGT TGGAATAATT TTCCAAGTGG TTCAGGCAAT TCGGCTTTAA 
    ACTTTCTGCC GGT

AT5G23960.1

Model type
Protein coding
Short Description
terpene synthase 21
Curator Summary
Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.
Computational Description
terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G23960.2

Model type
Protein coding
Short Description
terpene synthase 21
Curator Summary
Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.
Computational Description
terpene synthase 21 (TPS21); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14490.1).
Link
InterPro Scan - TAIR