1. Home
  2. Mutant Lines
  3. 52-0158-1

52-0158-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 285101 [Map]; Strand: w
      • AT4G00695.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon5 (3UTR)
      • AT4G00695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon4 (3UTR)
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: -950; Region: promoter
    Flanking Genome Sequence: 52-0158-1 - 5-prime edge 
    TTCATGAGTA TGTTACTCAT ACACTCAAAA ATATCTAACG AGTGTAATAT 
    TATGTATTAG CGAGTGTTTT ACAATTGACT GCATGCATTT TAGAATTATA 
    TCTTGATTGA GTGAACAAAA CTCAAAAGGT CTAAAAAGAA TTAGTTCGAA 
    TCGGCTGAAA ACTTCGAGTT CCGAGAGTTC CGGTTTATTA CCGGTTTACA 
    CTTAACCAAT CTATAAATTG GTAAGCAATT CTATCGACTA ACATAAACCC 
    TTGATAAGTT AATAGATTAT TGTTTATACG TATTCCTACT AGAGACGTGT 
    TGCGAAAGTG ATACGTCTCC TAATTAAAGA GAAAACGAGA TTTAATCGTT 
    ATTAAGAAGA AACTTCAAAG TCTTTCATGG ATTTTTAGAC TCTGAAGTAG 
    ACGCTTTTGT CTTCTCTGTA CGTATATAAT ACGTTCTTAT TTTGACTTTT 
    ATTTGGCGTT TTTTTCCAAT TTCGTTTTAA AAATTCCAAA GGTAGCTAAC 
    TTTTGGCACT CAACTGCGAC AAGCTGTTCA AAAATGATAC ATCTGTTACA 
    TATGATTTAT TAAACTAAGA CATTTTTATA ATATATGTCT TCAGATATTG 
    ATTATAACGT CCAAAAGAAA AACAGAGATG CTCTGATTTT TATAACCCAA 
    GAAATACGTT ACCTGACGTT AATAATTGCC TAACAAACGA TTAGGCCCAA 
    CAAAAAAACG TCTTATAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 284985 [Map]; Strand: w
      • AT4G00695.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: intron4 (CDS)
      • AT4G00695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon5 (3UTR)
      • AT4G00695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 52-0158-1 - 3-prime edge 
    CTCATGAATA GCAAAAAGAN GAAGAGATGT TCGCTAACAA GCAAAGATGT 
    TAAAACCCTC TCCGAAAAAA AAAAACCAAA NNNNCCTTAA ANCANNCAAN 
    ANTTTGGGNG GGGNTNAAAA NNAATNGNCG NACCCANATC CAGGGAANGT 
    ACCCGTCCTT TGNTTTTCCA NCNNCCTTTN TTNGNAAAAN CNGNNGNCNN 
    NNGGTTTNGN ANCCCTTTTT NNNTGTTNCT TGNCCNTCGN ANNNGGCNGG 
    TTCCTNCCGG NTCNTTNAAN CCCAAAAAAA ANNCNTNTAA NTTTTNGGCN 
    NGGAATTTTN TCCAANGGNC CTTCCCNTAN CTTTTTAAAC TTTNTCCCAA 
    NCCCANCCTT TNCCGGGTTT TTTTTTTNNA CTTTTNGNGG CAAATTTNAG 
    NCAAAATNNC CNNANNGTNT NCNGTNTNNT NTNCNNNCNT TTTNANNANG 
    TTNCANNTTT CCAAANGGNT GNNTTTTNGG NCANCCNTNG GGGCAANAAA 
    AGNNTNATNT TNNACTTTTT TTTTTACATN CNCCNTTACC NNAANCCCTG 
    CAAAATNCCN TTTNNTNGNN TCANAAAATN AAAAATNAAT AGCTTCNCAN 
    TAACAAATTT CAGGATTTAA AAAAACAAAA AGGGTCGGAG GTTAAAAAAT 
    ANCCGAAAAA TCGGANCCTN TTAANATCAA ATTTGTCAGC TCCTAAATNT 
    TCGAAACCNC TTACTTTGGC CCGTCAAATG ACTAACTTT

AT4G00695.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3).
Link
InterPro Scan - TAIR

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR