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52-0165-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7384004 [Map]; Strand: c
      • AT5G22310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 52-0165-1 - 5-prime edge 
    GTCGGAGATT CGTAGGATTT TGGAGGTGAT TGATGGTTCT GGTTCTGATG 
    ATGATGAGGA GAGTGATCTT AAGTCCATTG AGTTGAACAT GGAGAGTGGT 
    AGTAAATGGG GTTATGTTGA TAGCCTGAAA GATCGTCGGA GATTTGATGG 
    CTCCGGCGGC GATGATGATG ATGATGATCC GGTGGAGAAG AGATCAGTGA 
    TTGTTGAGAA TGGTGAGAGA GATGAGTCTT TGAAGACTTT GAGAGATTAC 
    ATTGTTTCAA ATGTTAGATG TATTGGTCCT TCATCGTCAG AGCAGTGGAA 
    TCATCGGAAT TTACCAAGCT CTGAGTTTGT GTAATCACCA CCGCTAGCGC 
    CGGCGAGGAA GAAAAAGAAA TCATTTTTTT TTATAGTATA TAATATTTCA 
    GTATTTGTAA TTTATTCAAT TTAATTTGAA ATACAAAATC AATTACGGAA 
    TATTTTTTGC CGGTATATCA CATTTTTTCG TCTACAATGG TTTAACCTCA 
    ATTTACTACA CATATCCAAT CAAATCATTA TTTGCATTTT CTATCAAAAT 
    ATTCCGTTTT TATGATCGAA GTTTCAAGTT TGTAATCAAG TGATTTGNCA 
    NAATTTGAAG TCTATTACGG AACTTAAGTG CTTATTTTAN AGAACANCAA 
    TTCATTACGT NCNANTTTTT ATGNNNGNAC CTAACTCTAA TANACCNTAT 
    GTNNATGTAA AN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7384124 [Map]; Strand: c
      • AT5G22310.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 52-0165-1 - 3-prime edge 
    CGACGACCCT TTTCCTTCTT CACCATCCAA AACCCGCCGG AGCTCCTTCT 
    TCAGCCGCTC CACGGCGGCG TATTTATCTT CGAACTCAAA CTTCGCCTCC 
    GTAAGCT

AT5G22310.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR