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Mutant Lines
52-0178-1

52-0178-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 706164 [Map]; Strand: w
- AT5G03010.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 626; Region: intergenic
- AT5G03020.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -1093; Region: intergenic

ATTGTCTGCC TCCAGCGTCC GGGTGATTGA TGTAAGTCTT AGGTCTAAGA 
CATGAGTAAT AGAGGAAAGA GTTGTATAAG TATATGTGAA AGAATGTGTA 
ATAAGATTTA AGAATGTAGA AGTTAAGCAA AGCGTTTCCC TTGTTGTCTC 
TGTAGAACAA AGAAACCAAA TCTGTGTGAG AGATAGAGAT GAAAAGAACT 
AACCTGAGAG GTTAGAAGTG GGAAAAGAAA ACCAACACAA TGATCAATGT 
GATTTTAATC TTTTATTCAG ATTTTAATTA TTAAACTTTT TAGAAATACA 
TCTAAATCTA ATAAATTGTT TTTTTTTTNG NNNNNTNANN AANNANGNNA 
TTTTTTTNAA NNNANNAAAN NANCAANGTN ANNNATTTNT TGGNGAAAAA 
GGTTTTTTNA ANTTTTTTTA AAAAAAAAAA AAAGGNCCNA ACCTTTTNNA 
AANCTTTGNA NTTTTTCCNT TTTTNGAAAN TNAAAAAAAA ACCGGNTTTN 
TNANTANNAA ACNNCCTANT TTTNACCCCG GGGTTNCCCG GGGNAAAANN 
NTTTTTTTTN AAGGTNGGNT TNTTNAAAGG TTGCCAATTG GNTTNTTTNT 
ATAAAAATTT TTTTTTTTTN ATTTNCNANT GGNNTTTANN AANGGNNTGG 
CAAAACCNNN CCNNCAAACC NGGNNGGNAA AAANCCTTTT TNTTTTNCNA 
ANNNGGATTN NTTTTTNNAT TTTN

3 prime edge [+] show sequence

Chromosome: 5; Position: 706042 [Map]; Strand: w
- AT5G03010.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 504; Region: intergenic
- AT5G03020.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -1215; Region: intergenic

CTATCTGGCT TCTAAGACTA ATGAAGCCAG AGATATGATG CTTCGAAAAT 
CCAACAACAC CGGCTCTGCC TTTTGATTGT CATGTNTCTG ATACTACNNN 
AACAAAAAGT ATGTATTTTC CATTGGTTTT GTAATGAATG TGCTATGATT 
TCTTCCTGCT GTTGTATATC ATTCTTTAAG CATTCCAAAG GACAAATAAA 
AACACCAATC ACTAGGAGTT TGTACACTCC CATGAGAGCA TACAAATCCA 
TGTGTTACTG TAGCAGAGTG CAAGAAGAAA GTGGAACGAA ATATACATCC 
TTTGATTCGA AACACAACTC TGTTGACGAT TCTATGATNC TCC

AT5G03010.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G03020.1); Has 525 Blast hits to 513 proteins in 25 species: Archae - 0; Bacteria - 11; Metazoa - 36; Fungi - 0; Plants - 477; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G03020.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G03000.1); Has 6713 Blast hits to 4194 proteins in 283 species: Archae - 8; Bacteria - 340; Metazoa - 4606; Fungi - 65; Plants - 1341; Viruses - 147; Other Eukaryotes - 206 (source: NCBI BLink).
Link: InterPro Scan - TAIR