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52-0195-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16571281 [Map]; Strand: w
      • AT4G34730.1 - [+] show detail - ribosome-binding factor A family protein
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 52-0195-2 - 3-prime edge 
    CAGAGACCTT TTCAAATCCA AAACAGAGGA ATATAAGAGA TTAAGGAACC 
    ATTGTGACGA TGCCTAACTT GCTCCACACC AATCAATCTC ACTTCTTCTT 
    CCTCCATCAT CCGCCAATCT ACACCGTCAG TTCAAAGACG CAGGCTTTCC 
    ACTTCCCGCA NTCTTTGGCG CCGGTCNACC TCCGTACGAA TCTCTCCGTG 
    CGCAGGACCG TACGGTGTAT GGCGAACCGA GGAGAGTTAA GATGGTGGCT 
    AAGCANATAA TGAGAGAACT CTCCGACATG CTTCTAACNG ACACGGTTTT 
    ACNACACGCT GTCTTACCTG AAGNTGCACT TTGGAGCTGA CCGCTNCCTT 
    CTCTTCTCTC ACCACCATTA GCGATGTCGA AGTCTCT

AT4G34730.1

Model type
Protein coding
Short Description
ribosome-binding factor A family protein
Computational Description
ribosome-binding factor A family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome-binding factor A, conserved site (InterPro:IPR020053), K homology-like, alpha/beta (InterPro:IPR015946), Ribosome-binding factor A (InterPro:IPR000238); Has 4827 Blast hits to 4826 proteins in 1979 species: Archae - 0; Bacteria - 4129; Metazoa - 5; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 652 (source: NCBI BLink).
Link
InterPro Scan - TAIR