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Mutant Lines
52-0199-1

52-0199-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 18015066 [Map]; Strand: c
  - AT4G38510.1 - [+] show detail - ATPase, V1 complex, subunit B protein
    Distance: -65; Region: promoter
  - AT4G38510.2 - [+] show detail - ATPase, V1 complex, subunit B protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G38510.3 - [+] show detail - ATPase, V1 complex, subunit B protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G38510.4 - [+] show detail - ATPase, V1 complex, subunit B protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G38510.5 - [+] show detail - ATPase, V1 complex, subunit B protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 52-0199-1 - 5-prime edge
```
ACCANCATAG ATCTCTCTGC TTGCTGTGGC TCCTTTCTTC CTCTACACAG 
ATCTTTGGAT TCAGAAGAAA GAGGTACGTA CACTCTAAAC AATGTCTTTC 
CCATTTCTCT ACTTGTCGAT TATTCCCATC CATTTGTTAT CTTCGTTTTG 
AATTTGTTGT TAGGTTTTAT GCTCTGAGGG TAAGTAATCC CGTTGATCTG 
ATCGAGAAAT TCATATTGAT AGAGCTCTAA AATTGGGTAA AATGGAACGA 
ATTAAGTAGA TTCACGTCCA TCGCTTTCCT TTGAGTCTCT GATACT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 18015142 [Map]; Strand: c
- AT4G38510.1 - [+] show detail - ATPase, V1 complex, subunit B protein
  Distance: -141; Region: promoter
- AT4G38510.2 - [+] show detail - ATPase, V1 complex, subunit B protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G38510.3 - [+] show detail - ATPase, V1 complex, subunit B protein
  Distance: 0; Region: exon1 (5UTR)
- AT4G38510.4 - [+] show detail - ATPase, V1 complex, subunit B protein
  Distance: -12; Region: promoter
- AT4G38510.5 - [+] show detail - ATPase, V1 complex, subunit B protein
  Distance: 0; Region: exon1 (5UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGG 
ACTATACATA CATACCACCG ATTTCAATTC AATCAGTTTC ATAACTTTCA 
GCTAATTACA TTTATAGCCT TTTACTTTCC CATATTATCA CATTAATCAT 
TTTCTCATCT TTATACTTTA AAATTTTTGA AGAGAAAAAA AACATATCCA 
ACGTTCTACN TTAATTTGGT ATGATTTTTT TTTATTTATT TAAAACACCT 
AAGTTATAAG AAAACCTAGT TNGGTAAGAT TTATTTTGTC CCGCTATTTT 
TAGATTTTAC AGAAAATTAT GGTCTTTTAG AAAATCATAA GTTTACTAAT 
TAGTAATTAA TACAAAATAG TATTTATCAA AATTTAATAA TTTTCTTTAA 
TTTTTTTCAA AAAAGAAAAG AATAAATCAA GTATTGATNG ATATATGTGT 
TAAACTCTTT GCTATTTGCA TTTCCGAGAG ATTTAATAAT GAGAGAAAAA 
ATCTAAAAAT TTCATTTTAA GAAAAGTTGA AAACTCTCAG GCGAGATTAT 
ATGAGAGCTG AGACTTATTG ATTGGGTTCA GAACACAACT GCATACCAAA 
GGCCATGGGG TTTTGTAAGG CCATGGTCTG AGAATAAGCT GAGTTTCTCT 
AGTCTGAATC AGTAATACCT TAAAAAGCAA GCATGAAAAT TAATGAAGAA 
GAAGAAGAAT T

AT4G38510.1

Model type: Protein coding
Short Description: ATPase, V1 complex, subunit B protein
Computational Description: ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1); Has 40414 Blast hits to 39266 proteins in 9675 species: Archae - 969; Bacteria - 20976; Metazoa - 1668; Fungi - 811; Plants - 8180; Viruses - 0; Other Eukaryotes - 7810 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38510.2

Model type: Protein coding
Short Description: ATPase, V1 complex, subunit B protein
Computational Description: ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38510.3

Model type: Protein coding
Short Description: ATPase, V1 complex, subunit B protein
Computational Description: ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1); Has 40414 Blast hits to 39266 proteins in 9675 species: Archae - 969; Bacteria - 20976; Metazoa - 1668; Fungi - 811; Plants - 8180; Viruses - 0; Other Eukaryotes - 7810 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38510.4

Model type: Protein coding
Short Description: ATPase, V1 complex, subunit B protein
Computational Description: ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1); Has 40414 Blast hits to 39266 proteins in 9675 species: Archae - 969; Bacteria - 20976; Metazoa - 1668; Fungi - 811; Plants - 8180; Viruses - 0; Other Eukaryotes - 7810 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38510.5

Model type: Protein coding
Short Description: ATPase, V1 complex, subunit B protein
Computational Description: ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1).
Link: InterPro Scan - TAIR