1. Home
  2. Mutant Lines
  3. 52-0202-1

52-0202-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3952989 [Map]; Strand: w
      • AT4G06700.1 - [+] show detail - transposable element gene
        Distance: -2387; Region: intergenic
      • AT4G06702.1 - [+] show detail - transposable element gene
        Distance: 4193; Region: intergenic
    Flanking Genome Sequence: 52-0202-1 - 5-prime edge
    TACTCAATCA TACACATGAC CTCAAGTCAT ATTCGACTCC AAAACACTAA 
    CCAACCTTCT TCTTGCTTTT CAAAGATTTC ATGGTTTAGC CAAAGTCCAT
    ATGAGTCTTT GGCTTTGTGT CTTCTAACAA GGAAACACTA CTTATGCTTT
    TAAGATTGAG TTGCGGTTTA AGTTGTTATA CTCAATCATA CACATGACAT
    CAAGTCATAT TCGACTCCAA AACACTAACC AACCTTCTTC TTGCTTCTCA
    AAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3950915 [Map]; Strand: w
      • AT4G06700.1 - [+] show detail - transposable element gene
        Distance: -313; Region: promoter
    Flanking Genome Sequence: 52-0202-1 - 3-prime edge
    ATTGAGTATA ACAACTAAAA CCGCAACCCG ATCTTAAAAG CCTAAGTAGT 
    GTATCCTTGT TAGAAGACAC AAAGCCAAAG ACTCATATGG ACTTTGGCTT
    CACCATGAAA GCT

AT4G06700.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
CACTA-like transposase family (En/Spm), has a 5.7e-54 P-value blast match to dbj|BAB64937.1| TdcA1-ORF1-ORF2 (Daucus carota) Spm/En-like (CACTA-like)
Link
InterPro Scan - TAIR

AT4G06702.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR