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52-0241-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5895909 [Map]; Strand: w
      • AT1G17235.1 - [+] show detail - ROTUNDIFOLIA like 11
        Distance: 199; Region: intergenic
      • AT1G17240.1 - [+] show detail - receptor like protein 2
        Distance: 507; Region: intergenic
    Flanking Genome Sequence: 52-0241-1 - 5-prime edge 
    AGACAGGAGC AGTATATGAT TTGCAGATCA ATGAAAAATA AATTTACATA 
    TATATGATTG TCAATGTCAG ATGGTTCTTG GGGATGAAAA AAGTACCTGA 
    TTCATGGAGA TTTTGGAGGA GACGAAGTAG AAGAGGTGGA GATCATGGGG 
    ATGAAAAAAT TGGGTTTTGA GAAAAGAAAA AAGCCAAATA AAAACGATAA 
    CATCCATTTT TTATTTTTGT TATTATTTTA TATGAAACAA AATCCTCCGC 
    GAAAAAGAAA GAGTACAAAA GTGTATCAAG CTGATGTGTC AATCATAGAA 
    TGCATCAGTT ATTTTAAAAG TGACTGTCGA TTTAGTATAA TTAGATTTGC 
    CATCTGATTC TAGTAGAATA GTTTGGGTTC AATTTCAGTG TGTCATTGGA 
    CGTTT

AT1G17235.1

Model type
Protein coding
Short Description
ROTUNDIFOLIA like 11
Curator Summary
This gene is predicted to encode a small protein with a DVL domain found in the DVL / RTFL protein family. Over-expression analyses using truncated versions of a related family member, ROT4, suggest that the DVL / RTF domain is involved in regulating cell proliferation.
Computational Description
ROTUNDIFOLIA like 11 (RTFL11); Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G17240.1

Model type
Protein coding
Short Description
receptor like protein 2
Curator Summary
Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.
Computational Description
receptor like protein 2 (RLP2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G72300.1); Has 90767 Blast hits to 27052 proteins in 1087 species: Archae - 40; Bacteria - 7835; Metazoa - 18686; Fungi - 1120; Plants - 55519; Viruses - 2; Other Eukaryotes - 7565 (source: NCBI BLink).
Link
InterPro Scan - TAIR