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52-0255-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 120569 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0255-1 - 5-prime edge 
    TTCTGAGTGT CTGTGTTTCC GTAAAGACGA ATCCGAAACG CCATCTGAAA 
    ACGTGGAGCA TTGCGACATT GTTCCCCTCG ACGCTCAGGT TGCGTTTAAC 
    CTGGAGGAGC TTGCTAAAGG CGTCAGCTTT CGTTCTGGGG AAGAGCGGAA 
    TCGGCATTGT CTACAAAGTG GTTCTAGAGA ACGGGCTCAC ACTGGCCGTA 
    CGGAGATTGG GTGAAGGAGG GTCTCAGAGA TTCAAGGAGT TTCAGACAGA 
    AGTTGAAGCC ATAGGGAAAC TAAAACATCC TAACATTGCT AGTCTTCGAG 
    CTTATTATTG GTCTGTCGAT GAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 120685 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0255-1 - 3-prime edge 
    ACTCAGAAGC CCTTTTCTTG GATTCTTTCT CGACTCCGAA CTGGTTCTCG 
    CGGTTACAAG CGCAGAACTT TGAGTAGCAG TAAGTGAAAA GCAAACCCAC 
    AAGGCAGATA CCAAACACGT CGCAGAGAAC AATGGCAATG ACNGGCGCCT 
    TTTGCTCAAA CCACTTGATT TCTGTTTGGT TTCAGAGTTA GTACTATCAG 
    AATCCTCAGG TGGGTTGTTG CTTGGGATAA AAGGGTAAGA GGCATTGAGG 
    CCAAGTTGAT ATCCTTGGCA AAGGTCCTTC AATGGAGGCC CGCATAGACC 
    AGTGTTGCCG ATAAACGCCG TTGGTCCTCT GTTCATAAGA GCACCGGTTT 
    GAGGAATGGG ACCGGAGAGA TTGTTGAAAG TGAGATCAAT GTAAACCTTT 
    TCAGGAAGAT CTCCAAGGGC AGGTGGGATT GAGCCGGTGA ATTGATTATG 
    AGAGAAATCA GCAGTTCCTT GAAGGTTGGA GAGGTTTCCA ATGTCGCTGG 
    GGATGGAGCC GTTGAATTGG TTGAAGGCGA GGTCGAGTTT CTCCAGAGAG 
    ACGAACGCTG AGCCAAACCC ATCAGGCAAA GGACCAGACA AGTTGTTTCT 
    GCTGACATCG AGTGTTTTAA GTCTGTTGCA TTGCAGAATC GAAAGTGGTA 
    ACGACCCGTT GAAGAGATTC TGTGACAAAT CTAAGGTCTG AAGAAGCTCC 
    ATCCGGGNCC GNNGACCNCT GNCCCCNNNN NNNNTGNGCN TGA

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR