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52-0275-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8279376 [Map]; Strand: w
      • AT5G24316.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 52-0275-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC ATAGTCTTCT TTGATATAGA CAGTTGGTTC 
    CTTTGTCACA ACCTCATCAA CCTTTCAAAA CCAAACTCAA TCGTTTTTAT 
    CATCAAAATC ATACACTAGT TAAAAAGGAA GACACCTTTC TAATACTTCT 
    TTTTTG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8279266 [Map]; Strand: w
      • AT5G24316.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 52-0275-1 - 3-prime edge 
    TCCTCCTCCA CCGACACGAC GACCTCCTTT CACCACAAAT CACTAGACCG 
    TTACTTTTAC TAAACAAACT CTCTTGTCAT TAGACTTTCG TCTTCATCTA 
    GTAAATCTAA ATAAATAAAA TGAAATTTGG CAAAGAAAAC AACAAAGCTG 
    TGAATGCATT GATTTGGTTT TGGTAATACA AGAACAAAAG CTGTAAAGTA 
    CATTGACACT TTTGTTATAA TATATCAAGT GTAGTACTCC AACAAATAGC 
    CAGGACCGGG TTTGTAAGGA TCAGCTTCTA CATAAGCCTC AGGGCGATCA 
    AAGCCGAGAT CGTTCACACG GTTGCTTAGA ACATGAAAGA TGGCTTTTTT 
    GGAACCTCCA TATTCGTCTC T

AT5G24316.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR