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52-0298-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163667 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -287; Region: promoter
    Flanking Genome Sequence: 52-0298-1 - 5-prime edge 
    GTACTACCAC TATTTCAACA AGATGGTACT CGTGTGCATC ACATGCAACT 
    ATTAAGTATA GCTTGTAGAT TCATGTTTAT TTCAAGAGTA TATCACCTTG 
    TTATTCAATT ACCTTCTTTT ATGTCACGTT AAAATTTTAG AATTAGGGTT 
    TGGATGGTTA TGACGGTTGA GGCGGACAAA ACCGTCAACG GATCAAACCG 
    TTTTTTATTT ACCATTCATC AATTATAGTA TGCACTACTT CGTAGAAAAA 
    AAAAAAANCN GCTTNNGNAA NGGGTTTTTA NNANNNAAAA AAATTGNANN 
    GGNNNAAGTT NNTGGNCCCC CTTAAAANGN ANGNNANTNA ACCCNTAANN 
    AANTNAACCC GTTTGGNNGG NGGCNCCCNT TAAANGNTCC NACCCGGGNC 
    CGNNANCCNC CGNGGNCCCT TTAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163748 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -206; Region: promoter
    Flanking Genome Sequence: 52-0298-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAA 
    GAGAAATCCA AATACTAATT AAAAAAGCCA TCATGATTAA AATAATTAGG 
    CTTGAAATCG TACGTAGTCA AAAGGTTTGT CCATTAATTA AGAAATTAAT 
    AAAAATGGAC CATCATTTCC ACGTATCTAC AAATCTCTCT TACCCCCATA 
    TGCACATGTC TGCGAACCCC ATCATTTAAA ACCCCAACGT AGCAACCTCA 
    CCGCCTTCAA TCATCAAACA TCCAAACTCT ATCCTTTCGT TTTCTTGTTA 
    GAGAAAAATT AATACTAGAT GGGTAACAGT TTAGGCGGCA AGAAAACGAC 
    CAAAGTCATG AAGATAGACG GCGAGACTTT TAAACTGAAA ACTCCGGTGA 
    CGGCTGAGGA GGTCTTAAAA GACTTTCCCG GCCACGTCTT GTTAGACTTC 
    GAATCCGTCA AGCACTACGG TGCCCGAGCC AAACCACTTG AGGTATGTTT 
    TTTTTTTTTT TTNNAAAANN NNNNGGNANG GNTNNNGGGA AANNNNNNNA 
    AANNNNNTTT TNAAAAAAAA ANNNTTAANN NTTTTTNGGN NNCCNGNNAA 
    ANCAANGGNG GNGGGCAANC NGGTTTTTTT TTGNGGGGNA CCCGGNAAAA 
    AANNTNCCCC CNAAAGGGNT AAAANNNGNN TTTNCCNCCC NGGCCNGGGN 
    CCCGGNNNNN NTTNNTNA

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR