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52-0317-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 710062 [Map]; Strand: w
      • AT2G02610.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -650; Region: promoter
    Flanking Genome Sequence: 52-0317-1 - 5-prime edge 
    CACATTAAGA TGATTAGTTT GTTTCCGTCG TTATTGTACA TTGTGATTTG 
    TGAAGATAGC ATTTAGTTAG CCACTTAGCC CATAAGTTAT TTATTGCCAC 
    TAATATGCCT CCATAAACAA TCACNGATTA GATTATTTCA TAATATCATT 
    ACAGAACATG GATTAGAATG TCCAATGACA CAATTTTATT AAAGAACTTA 
    ATCATCCATG TGCAATAAGC AATAAACTGA TCCATGTGCC TTGTATTATA 
    TGTTGGAATC TATCTCATCA ACGACGTAGG ATTTCTAACA AGGACTGATA 
    TAAGAAGTCA ACTTAATCAT CCAACCAAGG CCAGCCAATT CGGTAACGCA 
    ACCACTACTT CTAATTGTTT CGAATCAAAT TTTGGAGTAT ATTTTCGTTT 
    TTGTTTGACA ATACTAATTG CAACATTTTT GTTTGACTAT ACATTTTCGA 
    TTAATCATGA GCGTAACAAG CCAACAAACT TTTTTTTCGG TCCAACAAAC 
    TTGATTAGTT CATTTGAAGT CCACCTTTTG CAAGGTTTTT TTCTTTCGTG 
    TAACTAATTA TTTTTAAATT GAACATATGA ACTTATATAT AAATTATAAT 
    ATTTTGCTAA TATGTGTATA TATCGGAATG AAGGAGAATA ACAATATATA 
    TCCTAAACCA AAGAAAAAAA AGAATCTCCG ATTGAGCAGC CATGGACTTG 
    TTCGGAGAAT TCATAAAGTG GAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 707316 [Map]; Strand: w
      • AT2G02600.1 - [+] show detail - pre-tRNA
        Distance: 448; Region: intergenic
      • AT2G02610.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -3396; Region: intergenic
    Flanking Genome Sequence: 52-0317-1 - 3-prime edge 
    TTAATGTGGA TAAATGANAA ATTTTATTGT CAAATCAATT NAGAAACCGA 
    GTGATCTATA TTATACTGAA TATTGTAAGT TGAACATGCA TGTTCATCTC 
    TAATGATCAA AAGACAGCAT GTCACTATTA TACACTAATG CCACACTAAT 
    GTAAGACAAA ATGCATAAAA NAAAANGTGG AGATGCGGGG TATCGATCCC 
    CGTACCTCTC GCATGCTAAG CGAGCGCTCT ACCATCTNTG CTACTNCACT 
    AGG

AT2G02600.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Ala (anticodon: AGC)
Link
InterPro Scan - TAIR

AT2G02610.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02640.1); Has 1583 Blast hits to 622 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 1569; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR