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52-0343-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2665537 [Map]; Strand: w
      • AT1G08440.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 194; Region: intergenic
      • AT1G08450.3 - [+] show detail - calreticulin 3
        Distance: 2261; Region: intergenic
    Flanking Genome Sequence: 52-0343-1 - 3-prime edge 
    CATATAGTAA TCTGAATACA ATGGGTAATG TTTTTGCCGA TAAAACTTTT 
    CAACATTCAA GTTAATAGAA ACTGCATAAC TTTGTAGGAA ACAAAAAATA 
    TCGGAAAAAC AGAGAAAATA ACCATGGTCG AATTAGGTTG GATCTAATAA 
    CAATTCCTGT TCGAGGGAAC TTTATTTAAT ATACATGATT AGTCCCCTCC 
    CCACCACCTC TAAACCCTAT AATAAATAGT TAGTTATAAC TTATTACTAA 
    TTCTTTTTAA CGCCACTATC TAAAAGATCA CTAGCATTAG TGTGCTCACA 
    TGATACACGA TTTGTATGTA CATGTATATC ACCATCTTCA TTTTTGTCAT 
    GGATCGAATC ATCATCGTTA ATCTTTATGG TGACATGATG ACATGAGTCC 
    ACTGAGATC

AT1G08440.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: aluminum-activated malate transporter 1 (TAIR:AT1G08430.1); Has 610 Blast hits to 608 proteins in 146 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 10; Plants - 352; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08450.3

Model type
Protein coding
Short Description
calreticulin 3
Curator Summary
Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.
Computational Description
calreticulin 3 (CRT3); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.2).
Link
InterPro Scan - TAIR