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Mutant Lines
52-0437-1

52-0437-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 75881 [Map]; Strand: c
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: -492; Region: promoter
- AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: -503; Region: promoter
- AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon2 (CDS)
- AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
  Distance: 0; Region: exon2 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT ACTCCAGAGA GTGATGTTCT CAAACCTGCA 
GTGAGGAGGG AGGATGAGTA GAGTAGAGTA GAGAGCATCA AAAGAGTTGA 
AAATGTAATC CATAGAATAT ACCTGATTAA AGATCGGGAA GAGGCGAAGA 
TGCCCTCGCT GCCACCGTAG AGGAGGAGAG AATTACCGAC ATCGTGGAAG 
GGCTGGGAAG AGTAGATGTG GGCGGAGGCC CCAGCGATTC TAAAGTGTAA 
TGATAGAAGA AATGGGCACA GCAGCGCAGA CAGCTGGATC AGTTTTCCCA 
AATCCATTAT CGGGGAACGA GGATCTCTGA GGCTAACTAA CAGGAAGGAA 
GCGGGAGAAG AGCAGCTGCA GAGTCGCTCT TGTTCTAGCT GCTGCTGACT 
TTGGTGGACC AACCAACTTA ATATAATGGT TTGGGCCTTA GAATGGTTTG 
GGCCTATACC GAGAGGCCCG GCTTACCCAG AAAGAAATGC AGCAATAGTC 
AATGCCACTG CCTGGAATTA CCANCCCGGG CCGCNCCCCN NNNCCCNTTT 
TNAANNANGG GNNACCTTCN NNNNANNNNN TNGNNNNANC CNTNCNANNG 
ANAAAAAANC NTGGGANANN ATNNTNTGGN GATNNNNNNN G

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75923 [Map]; Strand: c
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -534; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -545; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 52-0437-1 - 3-prime edge
```
CAAGTCTGGA GGACAATTAC CGGTAAGGGC CACCGCAGCA ATGGGTTAGT 
TCAAGCAGTG ATCTTTGAAG CCTCCGATCG TAACAATATC GGTGGTTCAG 
CTTACGGAGG CCAAAGATCT ATTTGCTGCA CTCCAGATCT GGCCAAGCT
```

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR