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52-0463-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29714935 [Map]; Strand: w
      • AT1G78990.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0463-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TGGTGGTCAC GTGGAAGCCA CGTGCTTGCT CCGCCGCTTC 
    TCCCATTTGG TTGTTGTTTT CGGAGAGAAT GAAGAATGTT GTGTGGTGTG 
    GGTTGTTGGA AGATGCTGTC TAGAAGAGAA TTTATAACAG AGCTTAGGAG 
    TGAATTAGGT GAAACTTTCC AACATTTCGC TGATTTATTA ATTTGAGGAA 
    ACAGAACAAG CTGGTTTACG ATAATGCGTA CGGCCCATTA GTTTTCCGTT 
    GGGCCATATT ACCACCCATT GGGCCTTGAT TTTTCAACGA GATAATTAGA 
    AATAACTGTA AGCCAACAAC GTGTTTTGCC GCATGTCACG AAGAAACAAG 
    ACACAGTCAC TTGGATTCCC TCAATCTGCC AAGCAATTCT CTGAAACCTG 
    TGTATTCTTT ATATTGAGAC CAAATATCAC CGTGTTTGAA TCTTCTTTCC 
    AAAGAAACAG ATTCTACAAA ATTATTCTGA ATCAGTTCCT TTTCCTTCTC 
    CTCTGTTTCT TTTCATGTTT CAGGGACCAT AGTCACCATC TCCGATCAAA 
    TTGCATATAT CCGAGCATTC CACTAAGCTA CAATTACAAG TCACAGCTCC 
    GATAATTAAG ATCCATGCTA ATAAAGAAAG CAACGAACCC TTTAATCTAG 
    AAAGAAGGAT ACCAGTAATT ACGGCTACGA AATCCTTGCT TGAATACCAC 
    TAATGGCCTT TCATTTACAA GAGATCAAAA TATCAGTCAT GAAGAATTAC 
    CN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29714925 [Map]; Strand: w
      • AT1G78990.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0463-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    ACCACCAGGA AGCAAGTCAT CACGGCGGCT CTTCCCCTCC AGGACCACTG 
    GCTCCCACTC TCGAACCTCG ACCTCCTCCT TCCTCCTCTC AACGTTCACG 
    TTTGCTTTTG CTACAAGAAA CCACTTCACT TTACCAACAC AGTGGCTTAT 
    GAAACCCTCA AGACTGCTTT GGCAGAGACT CTCGTCTCCT ACTACGCCTT 
    TGCCGGCGAG CTCGTCACCA ATCCTACCGG AGAACCGGAG ATCCTCTGCA 
    ACAACCGTGG CGTAGATTTC GTGGAAGCCG GTGCTGACGT GGAGCTCCGA 
    GAGCTTAACC TGTATGATCC TGATGAAAGT ATTGCCAAGC TAGTCCCCAT 
    CAAGAAACAT GGAGTCATAG CGATACAGGT AACAGTTTCA ACGATAGTTC 
    ACTACAACAA CATATATATA ACTAGGTTTT TGTTTAATTT TGTGAACAGG 
    TGACTCAACT GAAATGTGGG AGCATAGTTG TAGGCTGCAC ATTTGATCAT 
    CGTGTAGCGG ACGCGTATTC CATGAACATG TTCCTCTTAT CGTGGGCCGA 
    GATCTCACGA TCAGATGTAC CAATCTCTTG TGTACCATCT TTTCGAAGAT 
    CTTTGCTAAA CCCACGACGA CCATTGGTCA TGGATC

AT1G78990.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Computational Description
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G32910.1); Has 2253 Blast hits to 2240 proteins in 120 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 21; Plants - 2228; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR