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52-0497-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3404335 [Map]; Strand: w
      • AT5G10770.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0497-1 - 5-prime edge 
    CACGCAGCCG ATGAGCAGGA TACGTTGTAG TAAGAAGTAG ACTTAGAAGG 
    GTTAAAGATT GGTTCCTTCT GGTCATAGCA AGTTCGAACA CATGGCTGAC 
    ACTGAGTCCA CGTTAAATCG CTTCCAGTGT CGAAGATTAG TGATAGATCG 
    TTCTTTGGTG TCCCGAGGCC GACCGTCACG ATGTAGTTAC CTGAACCGAG 
    TGTGCTTCCG TCTTTAGCCG GTAGATCCGT TGACTTGCTT TCACTGACGT 
    GATCTGTTGC GAGTTTCTTC GATAGTTTTG AGTGGATTGA GTTTACGCGA 
    GCCTGGTCGA GTCTTAGGAT CTCGACATGG TCTGGACTCG TGGCCTTGCC 
    ATTGTTTAGA CGCGAACACG TGCCGTGTCT ATGCGTCACG TGCAGTGAAG 
    ACTTTGTAGT AGACGCTGAA TAGGAATGAG ATAAAAAGTT CACGTTAGAA 
    AGAAAACGAA TATGCCCACT GCCCACAGAT TCTTTAAGTT ATCACCAAAA 
    AAAAACCAAA ACCTTATATT TTGTGGTCGT TGATGTATTA CTATCTAAGG 
    AAATGATAAA GAAAATTTTC AACTTATGTG GAGTCATACA GAGTTGTACT 
    TATATAATTA ACTCACAAAA GAGTNTAAAT TGTTGCAATT TTTGTTAACT 
    CACTCACTAG CTAACAAAAT TTTGATTACA ACTACTAATT ATTGNCGTTT 
    CCCCCATTAA ACATATACTA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3404267 [Map]; Strand: w
      • AT5G10770.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0497-1 - 3-prime edge 
    ANTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    TGCGTGTGGT TCTCTCTCTT CTGCTACAGG TTCAATTTCA GTTTTTGTAG 
    TTCCGGTTAT TACAACCATT ATAACCGTAT CCGGTTTTGT TAACCGGTTT 
    TTAATTTTTT ATTAGGAAAC GCCGGAAGCT GTTCGGCTTC GAATTGCATC 
    TACGGTATTC AATACGGCGA TCAATCGTTC TCCGTCGGAT TTCTCGCCAA 
    GGAGAAGTTT ACACTAACGA ACTCCGACGT ATTTGACGGC GTTTATTTCG 
    GTTGCGGCGA GAACAACCAA GGACTTTTCA CCGGTGTCGC CGGACTTCTC 
    GGTCTTGGTC GTGACAAGCT

AT5G10770.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: DNA binding, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR