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Mutant Lines
52-0513-1

52-0513-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 7110211 [Map]; Strand: w
- AT5G20950.1 - [+] show detail - Glycosyl hydrolase family protein
  Distance: 0; Region: intron3 (CDS)
- AT5G20950.2 - [+] show detail - Glycosyl hydrolase family protein
  Distance: 0; Region: intron3 (CDS)

GTCAAAAACA CAAACATAAA GTTGTTCAGT ATCATAGCTA TATAAAACAG 
ACCAATTCCA ACAAGAACAA AGTCGTTTCA AGTTTGTGAT AACCAGAGTT 
AAGGCTTTCT ATGACAACTA CTTGCCTGGT GACTCCAAGG CCTACATTGT 
GCGGGAAAAT GGTGGCGCCA TACACATTGT TGTGACCGTG AACAGCATCA 
ATCCCGTANA TCATAGGGAT CCCAAGGCGG GTCGAAAGAG ACGCCTTTTG 
AATCTCATTG ACCATGTTCA CCCAAGTTTC AGGGAGTAGC TTTTTCCGAG 
GGCACACTTC CTCCACCACT CAAAACACTC CCTACACACC AAAACCCAAC 
AAAGTCCACT CATTTAAACA ATATATCGAA CACTTAACAG ACAATAATTC 
CTCCAAGCTC AT

AT5G20950.1

Model type: Protein coding
Short Description: Glycosyl hydrolase family protein
Computational Description: Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 10079 Blast hits to 9261 proteins in 1444 species: Archae - 71; Bacteria - 6091; Metazoa - 14; Fungi - 1552; Plants - 486; Viruses - 0; Other Eukaryotes - 1865 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G20950.2

Model type: Protein coding
Short Description: Glycosyl hydrolase family protein
Computational Description: Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G20940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR