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52-0546-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14455404 [Map]; Strand: w
      • AT2G34230.1 - [+] show detail - Protein with domains of unknown function (DUF627 and DUF629)
        Distance: 0; Region: exon1 (CDS)
      • AT2G34230.2 - [+] show detail - Protein with domains of unknown function (DUF627 and DUF629)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0546-1 - 5-prime edge 
    CTNGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TTGATACTGG 
    AAGTGCCACA TTTGTTCTCA GGTTAACTAC TGTTTTACAG ATTGCAAGAT 
    GCACATCTTA GATAAGCATG TGCACAAATA TGAACCCGAG TTCAGTGATC 
    GTCCTAAGTA TGTGGATGAG ATTTTGGCTG ACATGATATG CTTGTGGGGA 
    TTGGAAGCCA GTGGATATAG GCATATAGCG CAGGCAGCAA ATCTGATTAA 
    TGATAGAATT AAGAGCCAGA AAGAGTTTGT TTATGTTAAT GGATGGTGTA 
    GTGATTGGCC TGTAGCGGGT GATGAAAAGC GGGAAACCAT TCTCAAACAG 
    TTTTCTGAGG TTCTTAAAGC TACCANCCCG GGCCGTNAAC CACGCTGCCC 
    CCTATAGATN NGAGTCTTNC ATCANNGANT CNNTACTNAN GCNTTTANGA 
    NCGNNTNNCG GNTTANGTTN TTATACTCNN TAATACNCNT NACTTNNNNT 
    NATATNCGAN TNCNAANNAC TANACANNCT TNTNNTNNCT NNTNAAGCTC 
    GANNCGGGCC GNNNACCNCC NTNNNCCT

AT2G34230.1

Model type
Protein coding
Short Description
Protein with domains of unknown function (DUF627 and DUF629)
Computational Description
Protein with domains of unknown function (DUF627 and DUF629); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF627 and DUF629) (TAIR:AT2G34220.1); Has 93 Blast hits to 93 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34230.2

Model type
Protein coding
Short Description
Protein with domains of unknown function (DUF627 and DUF629)
Computational Description
Protein with domains of unknown function (DUF627 and DUF629); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF627 and DUF629) (TAIR:AT2G34220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR