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52-0575-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9241233 [Map]; Strand: c
      • AT1G26730.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: -202; Region: promoter
    Flanking Genome Sequence: 52-0575-1 - 5-prime edge 
    CNTGGATAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCAGAG GAACAAAGGG TGGGGTTATA AGAATTTGCC 
    AACCATGCAA AAACTCGGAG TTTATTCAAC AAGTCCCTTA TATTCATATA 
    TATATATATA TATGTATATA NACTATAGAG AGAGNGATAT NGAGNCACAT 
    NAANATNTGC NAGTGNATAT ANTTTCACGT GAGAAAAATC AAAAGAGNTG 
    AAATACANTN GAAAAAGATG TNTGTTGTGG GGGGCTCTTG GGNGGACANA 
    NAGACCACTA AAATAAAATA NTTGCATAAC ANTNCACANT GTACAAAAAG 
    TCTNTNCTCT ANATNAAATC CTANNGGGGT CAAAGTGGGT GTGTGGTAAA 
    NACACACATC AAAATNATAT ACACACANAC ANAAGAGAGA AAACNGGNGG 
    NCGANACACT TTNTGCGTGG ANNGANNCAC TCNCACACTG TTCTAGAGAG 
    CAACACACGG NNCACAGAGA CCGATACATT GTTTTACGGG GGNTGTNNCT 
    GTNGANGGAA NAANAAAAGA ATTTAGAGGA AAAAAACAGA GAGNGAGAGA 
    CNTATAATTA AAANACANAG GGAGAGCNCT TANGTTTTAG TGTGGNGGCT 
    TAGAGAAAAT NACGNTTTGA GAAAAGTNTC TGANACCTTG TNGAGTGATG 
    AGAACTGAGA CNCACACTAT GTGGGGCCCT TCTCCGNGTN TTCAATTATC 
    TNCNNNANAG AGNNCACTGA NTCTNTTCAC NTGANC

AT1G26730.1

Model type
Protein coding
Short Description
EXS (ERD1/XPR1/SYG1) family protein
Computational Description
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1113 proteins in 206 species: Archae - 0; Bacteria - 6; Metazoa - 255; Fungi - 426; Plants - 338; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).
Link
InterPro Scan - TAIR