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Mutant Lines
52-0580-1

52-0580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 8497283 [Map]; Strand: w
  - AT5G24760.1 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT5G24760.2 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT5G24760.3 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 52-0580-1 - 5-prime edge
```
TGTAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
CATCCTACTT TCATCTTTAG AAGAGACCTT GAAGAAGAAG AAGACGAAAA 
CGAAAAAACG GAGCTTCATC ACCTAACACC GACCCTGAAG AAGAAGAGGA 
AGAAACAGAG GTTCTTCACC TAACACCGAA TCACCACCAA CC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 8497278 [Map]; Strand: w
- AT5G24760.1 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
  Distance: 0; Region: exon1 (5UTR)
- AT5G24760.2 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
  Distance: 0; Region: exon1 (5UTR)
- AT5G24760.3 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
  Distance: 0; Region: exon1 (5UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GTTTTGTGCT TGAAGTAAGA AAATTTGGGA GAACAATGTC GGCTTCTTCT 
TCCTCCTTTG AACAACCTCA AGTCATAACC TGCAACGGTA TAAAAAAAGG 
TTTTTTTTGT ATTTGTTGAT GAAAGATTAG GGTTTTTGAT TGAGAAATTC 
TGTAGCNGGC GGTGGCATGG CGTGCTGGTG AGCCATTGGT TATGGAGGAA 
GTTGAAGTGA GTCCACCTCA ACCACTTGAG ATCAGAATTA AAGTTGTATG 
TACATCTCTC TGTCGTAGTG ATCTCTCTGC TTGGGAATCT CAGGTTTGCA 
GTTTCTCTTC TTTACTATAA CCTGTTCATG TATTTGGATT TATAAGTGTC 
TCTGATGAAG TCTCCATTTA TGGTACAGTC TCTTTTGCCT CGAATATTTG 
GCCATGAAGC TGCAGGGTAA GTTACTTCTG TTCATAACCT CATTTCTAGA 
TTATGTAGAA TGTGGTGTGA AATTGAGTGT TCTGTTGTCA TTCTTAGTGT 
GATGTAGCAC CATTGTTGCA GTCTTTGGTA TAGGACTATT ATAACTAGAT 
TTGCCAGCTC AAGAGCAGAC CTTTCGTGGG TTAGTTGAGA GGTGAAGGTT 
TAAAGAAGAG CGAGGAGAAT GCGTTGCATT CTGGATTTGT CTANGGTCTT 
GGTTTANGCA TTGGTCGANA GTTANAGACT TTGCTCATTA TTCAAGTGTC 
TTCTATGGNC TACTTCTTTG NGAATTGAGT GAAAGAAAGA NTTT

AT5G24760.1

Model type: Protein coding
Short Description: GroES-like zinc-binding dehydrogenase family protein
Computational Description: GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G24760.2

Model type: Protein coding
Short Description: GroES-like zinc-binding dehydrogenase family protein
Computational Description: GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G24760.3

Model type: Protein coding
Short Description: GroES-like zinc-binding dehydrogenase family protein
Computational Description: GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1); Has 31909 Blast hits to 31894 proteins in 3124 species: Archae - 749; Bacteria - 20391; Metazoa - 1181; Fungi - 2292; Plants - 4048; Viruses - 0; Other Eukaryotes - 3248 (source: NCBI BLink).
Link: InterPro Scan - TAIR