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52-0585-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8120880 [Map]; Strand: c
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0585-2 - 5-prime edge 
    CTTCCAACTT TACTGAGAAA AGCCACAACA GAAGAAATGG TTGGCTTTGA 
    CAATTACAAA GAGAATGGTC ATCCTTTTCC TCACTCAATC AGTCGTTTTC 
    ATCCATCGCA TGCCTCCACG ACTACTTTTG GTATGTTACA TATTTTATTT 
    ATCACTTTCC ACACTCGCAA AAATTAGGTT ATAAACTTAT TATATAACTA 
    ATTCCGAGAC AATTATGTTA CATATATTTA TATGTACAGA ATGGTCAAGA 
    AACATCAAGA TCAATAGACA CAATGGAAGC TCATCATCAT AACTACAATG 
    AGACAACACC ATGGACTCAT CAAAGAAAAC CATCAATTTC AATGCCAACT 
    TCACCAAATG TTCTCATGAT CTCCGACCCG ACAACATCTT TGTCTTCCGA 
    AAACCACAAG AACAGTGGGT CGACTGGCAA ATCCGTCAAG TTTCTCTCTC 
    AGCCGATGAC CAAAGTCTCA TCTCTCTACA TAGAAAGCGG TAATGGTGAT 
    GATGATCGTG GTCAAAGCCA TGATAATCAT CATCATCATC TTCATCGACA 
    ACATCAGAGT GGTCATCATC AAAATCAAAA TCAGGCTGCG AACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8120996 [Map]; Strand: c
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 52-0585-2 - 3-prime edge 
    GTTGGAAGCT CTTCTTCTAC TTGTATCACA TAGTTTGGTT TCTCCTCCAT 
    TTTTTTCTTC TTTTTAATTT CCTCAGTAAC ATCCAAATTG TTTACGTATT 
    AATTGACACC TATAAAATTG AATTTTCTTT TTAATCTATA GTTAATTAAT 
    ATTCTAACTT GACTTGTATC ATTGATTCAT CATTAACACA AAAGATTGAT 
    GAGAATAGCC CTTGAAGTCA ATATATAATT TTTTTAGATT GTTGAAAGCA 
    TATGCGAAGG AAAACAAAAT ATATATTATT CACAGTAAAA AGACTTCTAG 
    CGAGTTCTTG ATTCATTAGA ATTTTACCTA TTCCCTTCGC AATTGCTCTA 
    TAACATGGTT TGGAAAATGA ATTTGGGATT TATATTTTCT AAAATCATAA 
    ACTGATAAAA TCTAGTGGTT TAATTAGGCC GATAATTAAA TAAATCTGAC 
    CTAAATTCTC CACATTTAAA CATCATACCT AATATACATT TTGCAAAGTC 
    TAGTGGTGTT GCCACTAAGC TGGTTTCCCA GCTGTATAGA ATTAGACTAT 
    ACTTAGTCAC TTACCCTATA TTTATTGGAA AAAATGATGC ATGTTATCGG 
    CTAGAAAGAA AAAAGAAGGC CACTATTGTT TGTTTATCCA AAACAATTGC 
    ACTTAAAACC TATAAATACT AGTGTGCATT TGGGCGCCTT TGAGAATT

AT5G24030.1

Model type
Protein coding
Short Description
SLAC1 homologue 3
Curator Summary
Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.
Computational Description
SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR