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52-0588-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18790105 [Map]; Strand: w
      • AT2G45600.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0588-1 - 5-prime edge 
    TCTACAGCGC CGCTTCAGCT CCTTTCCATG AATCTTGCAC CAAAATGGCT 
    GATCGTCTTC AAACTATAAT CCTCTCCGTC GAATACCNGT CTAGCTCCCG 
    AACACCTGTC TCCCGGCGGC GTACGAAGAC GCCGTCGAAG CCTATCTTAT 
    GGCTCCGTGA TCAAGCTCGT GGCGCAATCA ACGGTGGTGA TTGCGACACG 
    TGGTTAAAAG ACGGTGTCGA TTTCTCGAAA TGCTACGTCA TGGGTTCAAG 
    CTCTGGAGGA AATATTGTCT ACAACGTGGC GTTGCGTGTA GTTGACACAG 
    ATCTTTCTCC TGTTAAGATC CAAGGGCTGA TAATGAACCA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18789989 [Map]; Strand: w
      • AT2G45600.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0588-1 - 3-prime edge 
    GCTGTAGAGG ATAAATCCAC CGCCGTGGAA GTAAACGAGG ATCGGAAGTT 
    TTGATTCCGG CGGAATATTC CGTGGCTTGA AGATTCGGAT GAAGGTATTG 
    TTGGTTTGGT TTAATGGGAT GTCTTTGGAT TGCTCTGTTG GGGGCAGTTT 
    GGGGAAATCA CGGTGTCTGG TGAGAGATCC ATCTGAGTTA AGTGTAATGT 
    TGAGGAACTT GTATGGATCG CTTGAAGGTG GAGGAGCTTC CATGGATGCT 
    TCAGAGAATT AGCTAGATAT GTTTCTGAGG TGAAAATGTG TGATTATGAA 
    GAAGAATGGG GAAAATAAGG ATTTTAGAGG TTGAAACGAT CAACGTCTCA 
    TTAAAGTTTG GGACTTTTCA TTCAAAGTTG CAGTTGGATT TGCCTAAAGA 
    ATCGTCTGAC ATTAGCAAAT TTGTCTCCAT TAATAGTGGT TTAGATTAGA 
    GTTTATATAA TTTAGTAACG TACTATCGAC TATATTGACG TCAATTGAAT 
    AAGAGAACCT AATATAACGG CTAACAAAAT TGTACCATAA AAATCGACCA 
    AGAAGTTAAT GTGCATTGAC AAAGTAACGA CACCTTTTTT CTTCTTTTCA 
    TCTTCACTTA TCCAGTGTTT TTGTTCGGGC TAAAAGATCG GTTTTAGAGT 
    TTTGTTACTA GTGAACCTAA GCTAACTCAT TAGGTCGGCC CATTACAAGC 
    AGTTAACTCA TNCGGCCGGN CCATCATANG CAGTTGACCG

AT2G45600.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45610.1); Has 9264 Blast hits to 9243 proteins in 1540 species: Archae - 114; Bacteria - 5273; Metazoa - 690; Fungi - 865; Plants - 1337; Viruses - 3; Other Eukaryotes - 982 (source: NCBI BLink).
Link
InterPro Scan - TAIR