1. Home
  2. Mutant Lines
  3. 52-0594-1

52-0594-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13393781 [Map]; Strand: c
      • AT4G26530.1 - [+] show detail - Aldolase superfamily protein
        Distance: 674; Region: intergenic
      • AT4G26540.1 - [+] show detail - Leucine-rich repeat receptor-like protein kinase family protein
        Distance: 741; Region: intergenic
    Flanking Genome Sequence: 52-0594-1 - 5-prime edge 
    GTNATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGA GTATGTGAGT TTTATCATTT TTTTAATGTT 
    GTGATTGTTT ATTAACATAC AACTCGAATA TAATCTATTT TATAGGATAA 
    TGACCGATTG GGACTGGAGC ATTTGGAGTC ACACGCNGAT AACGATGCGT 
    GATTTGTTTT GTGTTTTGGT TGTTTGTTTT TATATTAACG ATTTGTGAAA 
    TTATGAAGAA GAATAAGAAG AAGAGAGGCT TAAGACAGAA GCGAGTGGAT 
    CACGTGGACC CTTGAGCCAC CCTCATCACA TGAGCATGTG CTGTCTCAAT 
    AACAATGACT TCGACTTTCC AGCCTAAATA AACGCCCTTT TTTTTGTTCT 
    CTTCGATTAT TAACATTAAT TTTATGATTG TTATTCGGAT AACTTTTAAG 
    CATAAATGTT TCTTCAATTT TGTTCACATA ATAAGCAGGA TAATGTTGCA 
    CAAGCCCTAA TCCATTTTGT AAGAGCATCC GCCTGATCCC TAATTTATGA 
    ACAATGTTAT CAAAAATAGT TCAAAGATTT GGATTTATAA CCAAACTAGT 
    TTTAGATCAT TCTTACAATT ATAAAATATC AAGTAAAAAT ATCTCTCCTT 
    CGGAAAATGA CTTCTTTTTT TTGGTGATTA ANAANAANAT AGACTTCCTT 
    GNGGGACCCA CTTAGGGGAT ATTACCCGAA CTTTTGAACG AACCGNTNTG 
    TCATGGCGCG AAATTTTATA GAAACCCTCA CAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13393780 [Map]; Strand: c
      • AT4G26530.1 - [+] show detail - Aldolase superfamily protein
        Distance: 673; Region: intergenic
      • AT4G26540.1 - [+] show detail - Leucine-rich repeat receptor-like protein kinase family protein
        Distance: 742; Region: intergenic
    Flanking Genome Sequence: 52-0594-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCTACTCTAA CCAACCTCTA ATACATACAG TACGTCAGAT AGAGTCGTTA 
    TGGAAATATC CTACATGCAT GGACCAGAGG AATGAGGTAC AAAACATCAA 
    TAAAAATCCA GATAAAATCG CAGTAGCCTA ACATGAGGGC ATGACAAGCT

AT4G26530.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G26540.1

Model type
Protein coding
Short Description
Leucine-rich repeat receptor-like protein kinase family protein
Computational Description
Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G56040.2); Has 218237 Blast hits to 120439 proteins in 3896 species: Archae - 151; Bacteria - 20470; Metazoa - 64079; Fungi - 7848; Plants - 101542; Viruses - 308; Other Eukaryotes - 23839 (source: NCBI BLink).
Link
InterPro Scan - TAIR