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Mutant Lines
52-0595-1

52-0595-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 3401000 [Map]; Strand: c
- AT3G10860.1 - [+] show detail - Cytochrome b-c1 complex, subunit 8 protein
  Distance: 259; Region: intergenic
- AT3G10870.1 - [+] show detail - methyl esterase 17
  Distance: 78; Region: intergenic

GTGATAAACT AACAAAATCG GTTATACTGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCA GGCCAAGGTC TACTTAAAGT CCTAGCCGGT 
ATCGACACCA ACTTCACAGT TACCTCAAAA GCCTTAGACG AAGAGAATGA 
CTCCGCTGAA CTGTACTTGA TGAAATGGAC AACATTTCTA GTCCAACCAA 
CGACTCTGTT CATCACAAAC CTTGTAGGAG TGGTTGCAGA CTTGCAGTGT 
TTGATTTTGC CTAATAGTTG TTTGTAGTTG ATGTCTTAAG GGAACATAGG 
CAGCGTTTGA TTTTGCCTAA TAGTTGTTTT GAGGGATCAA TATATTACTC 
GATTCAATCC AATTTTCATA CCATATATCA AGAAAGATGA ACAACAAGAG 
TCATTGTCAT GAAACCCAAA CATTTATTTA GCAAAAGAGT TTCAGAAAAA 
CTGACTCAGA AGATTCCCAC AAGAGTTTTT GTGAAATTTA TAGGCTTGAA 
ACAAAAGAAA TTACTTCAAA CTGTCAGGTT CTTGTAGAAA AGGAGTGACT 
TCATGCTTCA GAATCTGTGC TCAAGCT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 13590507 [Map]; Strand: w
  - AT3G33055.1 - [+] show detail - transposable element gene
    Distance: 6533; Region: intergenic
  - AT3G33058.1 - [+] show detail - transposable element gene
    Distance: -11293; Region: intergenic
2. Chromosome: 3; Position: 13591219 [Map]; Strand: w
  - AT3G33055.1 - [+] show detail - transposable element gene
    Distance: 7245; Region: intergenic
  - AT3G33058.1 - [+] show detail - transposable element gene
    Distance: -10581; Region: intergenic
3. Chromosome: 3; Position: 13592465 [Map]; Strand: w
  - AT3G33055.1 - [+] show detail - transposable element gene
    Distance: 8491; Region: intergenic
  - AT3G33058.1 - [+] show detail - transposable element gene
    Distance: -9335; Region: intergenic
Flanking Genome Sequence: 52-0595-1 - 3-prime edge
```
ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATGT 
GACATGACAT CAAGTCATAT TTGACTCCAA AACACTAACC AACCTTCCCT 
TTGCCTTTCA AAGCT
```

AT3G10860.1

Model type: Protein coding
Short Description: Cytochrome b-c1 complex, subunit 8 protein
Computational Description: Cytochrome b-c1 complex, subunit 8 protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b-c1 complex, subunit 8 (InterPro:IPR020101); BEST Arabidopsis thaliana protein match is: Cytochrome b-c1 complex, subunit 8 protein (TAIR:AT5G05370.1); Has 67 Blast hits to 67 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G10870.1

Model type: Protein coding
Short Description: methyl esterase 17
Curator Summary: Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.
Computational Description: methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Phenotypes

Morphological phenotypes

Determination of insertion point(s)

Notice

AT3G10860.1

AT3G10870.1

AT3G33055.1

AT3G33058.1