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52-0609-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3247043 [Map]; Strand: c
      • AT5G10320.1 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: -323; Region: promoter
      • AT5G10320.2 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: -322; Region: promoter
      • AT5G10320.3 - [+] show detail - unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; ...
        Distance: -323; Region: promoter
    Flanking Genome Sequence: 52-0609-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAA CGTGACCAAC TACTTCTTGG TTCAAAACAA ACATGTTTAA 
    ATTCTCAATT TACTAAAACT ATGATTCTAT AGTAACATGT CAAATGAGAA 
    ACATTTCAAT GTCAAAAGTC TGGTCCAATT ATCGAACTAC ATAAAAACAT 
    TTTAATACTA AAATAGTCTA TATTTTCTAC CACAAACTAA GGAAATGTGG 
    TGCGACGAAA AAAAACAAAA CTAAAAAACT AAAGAAATGT GGTATTATCC 
    AAAAACCAAT TATGCAATAT GATAGTTGTG CTGTGCAAAC CTTTTGATGG 
    AATGTTGTAG TAATGACCAA ATTCCATTTG TTTTTAGATT TTTTAGTTGA 
    AAGTTGAATT TTACAAAACA ACGAATCGTT TTTGTGAAAC TAATAACTTT 
    CATTTAAATA AGTCGGAATC GTTTTTGTGA CAAAATCTGT TAAAAGAGTT 
    TCATTATTTT TGATGGAAGA GCTAAAGAGA CTGGAGAAGT TTCAGACTGT 
    TGTATCATCC ATTACTTGTC ACGGTTTACT TTCTTCTTCA TCTTCCGATT 
    CAGCTTCTTC TTCTCGCTTC CTCTCCAATC TAGTCCTTTT CCTGGTAACC 
    ATAAAGTTTA NGTTTTTCGA ATTTTTTCAG TTTTGACGCT CCGTAAAAAA 
    AAAAATCTAA AATTNNTTTT TTTTTTAAGG GNCAACCNTG CGGGNAACTN 
    NNTTTAAATT CAAACTTGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3247112 [Map]; Strand: c
      • AT5G10320.1 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: -392; Region: promoter
      • AT5G10320.2 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: -391; Region: promoter
      • AT5G10320.3 - [+] show detail - unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; ...
        Distance: -392; Region: promoter
    Flanking Genome Sequence: 52-0609-1 - 3-prime edge 
    ATAAAGAGAA GAACTAACTA CTGTACAATT CTTTCTTCGA CGGGGATTAA 
    TATTCATTCT AATTTCCGAT CCAAGGGATT ATGGATCAAA GTCTAGAATC 
    TTCGATTTAT CAAGAAGGAA AAAAAACATG TTTTCTTTAA TATAACNTTT 
    TAGGGAGAAA ACAAAACTCT ACGATTGTGA ACTTAAGGAG AAAACAAAAT 
    TGGAACAGTT TGTGTTTTGT TTTGTGTTTT GTTGGATTCG TTACTCTCCA 
    CCGTCGCCGC CNTGTNCAAN NNNTNANACT NTGACTTNTT GGAGGCNNTN 
    CTTNCNNTTN GNNCCNNCNT CNCANANCNN ANCACANACT GNNCCAATNN 
    GNNNNCTCNC NNNGNGNNAN NNNGNCCNG

AT5G10320.1

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10320.2

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10320.3

Model type
Protein coding
Computational Description
unknown protein; Has 51 Blast hits to 50 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR