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52-0616-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2891285 [Map]; Strand: c
      • AT1G09000.1 - [+] show detail - NPK1-related protein kinase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0616-1 - 5-prime edge 
    TGCACCAAAC GCGCCGCGAC CAATTAACTG ACCTTTCCTC CACGAAATCG 
    GAGGTGCCAT GTCTACAGTG TTAGCAGGAG GAGGAGGCGA GAAGGAGGGT 
    TTGATAAAAA TCTTCGATTT GCGGATGCAA GAGGTGATCT TATCGGCGAG 
    AACACCGGGA AACGGAGGCT GGTTCTCCTG GTTATCGTCG TCGGAAGAAG 
    GACGGAAAAC AAGCGATCGA CGAACGGAGC CGAAGAAATC TTGCATTTGA 
    ACGATTGAGG GAAGAATGCG TTTCACTGTT ACTCTAATTT TGATTCATCG 
    GTCGGCACAA AAGTGTTNAC GAGTGAGAAG GAAAAAAGGC ATCNAAATTA 
    TNTTTTTGAA AAGAGAAAAT TACTTTACTT AAATTACGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2891404 [Map]; Strand: c
      • AT1G09000.1 - [+] show detail - NPK1-related protein kinase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0616-1 - 3-prime edge 
    GTACGGTGTA CATGGGTATG AATCTTGACT CCGGGGAGCT TCTCGCCGTC 
    AAACAGGTAA TTTAGGGTTT GTTTTTCTGA TTGCTGTGGA TTTGAAGCTA 
    ATTGGGACTT AATTTTGAAT GACCTAATTC TCTGGCATGT GTACNTGAAC 
    TTCAAAAGCT

AT1G09000.1

Model type
Protein coding
Short Description
NPK1-related protein kinase 1
Curator Summary
NPK1-related protein kinase 1S
Computational Description
NPK1-related protein kinase 1 (NP1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 2 (TAIR:AT1G54960.1); Has 134800 Blast hits to 132536 proteins in 4716 species: Archae - 154; Bacteria - 14967; Metazoa - 50642; Fungi - 13331; Plants - 33399; Viruses - 553; Other Eukaryotes - 21754 (source: NCBI BLink).
Link
InterPro Scan - TAIR