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52-0619-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 57594 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0619-1 - 5-prime edge 
    CCTCTCACTG GCGTCCGTTG GACTAAACAC TCGGCTTGAG ACTCCGTGAA 
    GTTACTGTGC GTCACCGGTG AGAAACCCAT CTGTAGAAAC ATCGCTTGCC 
    ACGTCATCAT CGGCCTTTCT ATCGGACGGC TACGATCCAA CACCAGCTTC 
    TCTATCTCCG GCTGTATAAG AAACCTCTCG ATCTTCTGCA TTGCGTCGAG 
    GTTGGCGTTG ACGGCGTCGA GGGATTCGAA GAGAGCGGTG TGTGAGTGCA 
    GCGAGTGGGC GAGCTGTTGA GAGAAGGGCA GATCCGTCCT CTCGCATCCT 
    CTGTCGGAGC AGACGATGAT CGTCGGAGAT AGATGCTTCA CGAAACGGAG 
    GACCAAAGGG AGGTGCGAGA AGGACGCGGC GGAGATGTTA ACGGCGACAG 
    CTTCTTTCTC CGACGAGTTA GGCCACGAGA TGGAGCCGAG GAGGTCTAAG 
    CTCAAAACTT GGATGTCAAG GGAGATGTTG ATCTCAGAGG CGAAGTGCTT 
    GAGGTTGTCT TGAGTGAAGC CAAGTTCGAG CTGGTCGTGG TTCGCCGGAG 
    AAGCGAAAAC GGTGATCTTG AGGGAGAGAG GAGCGGCGTT GTCGCGGAGA 
    ACAAGCTCTT GCATGAGGGA AGCCCATTGG CCACCGTAGC CGATATCGAA 
    GTCGATGATG TGGAGACGGT GGAAGCCATG GAAGGACTCT AAGAGGGCTT 
    GGTTGGANGT AAAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 57478 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0619-1 - 3-prime edge 
    GTGAGAGGCT TTCACGTCGA GAAGAAACAT AACTCACTTC TCCTATGTTG 
    GCAAAGGACA GAACTCGTCG GAGTTTCAGC ATGGAGATGT CGCTCCTCCT 
    GATTTCCACC GGAGTTTCAA TTATTAAAAA AATATTTTCC TTAATTCAAT 
    TTATCTTAAA TGACAAATTT TTAGTTTCTG ATTTTATTTT GCTCAGTGCG 
    ATGGATTTTT AAATTTAAGT TTCACACAAA TATATAAATT TTTGTGAGAA 
    GTTAATTAAT TGTCTGATTA TCAAACACTT ATTGTATAAC ACATTCAATA 
    TATATTAATT GTGGGGATTA TTTTTGATCG ACTAAATAAC GTGATAGAAT 
    AATGCTTGGA TTAGCTCAAT ACTATATTTT TCTAATTAAA AATGAATGGG 
    GTGTTGATTT TGATGCGAGG CAGAAAGCTA CTGCTCATTA TTGTGATTAT 
    ATGATTATAT AATGGTTAGA GTTTGTTGTG GTTTGTGTCT TTGCGAGGGG 
    TCTATTTTTA ATTTATAAAC ATATGTCTCC ATGATGTCAC ATGGGTCTTG 
    TATTATTTTA TTTATTTGGA CCACAATACA TTTTTGTGTG CGCCGTTTCT 
    AACCTTTTTT TTTCTCCGAC NAAACAAAGG TTNGCTTTTT CTCCTTTAAA 
    TGGNCCATAC NCATTACATA TTTAATGCCC CCATTTGCTT TACNCATTAC 
    CTGCATTTCT CTATANAAAT ATTTCAAAAC CAN

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR