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52-0633-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8392968 [Map]; Strand: w
      • AT5G24550.1 - [+] show detail - beta glucosidase 32
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 52-0633-1 - 5-prime edge 
    GTCATTAGGT GTAGGTTCAT TAGTATTTTC TTAATGCTAG AAAACAAAAG 
    AAAAGTTTTT TTTTTAAGGA CAGCCAAATA AAAGTTACAT AACTCGGNCA 
    TGGTNCTTAC ATTTGTATTG GAGGNGTTGG TCAGTCGTGA AGCGAGGTCG 
    GGAAANATCG ACGTGAANAT CGNGAGCGAC AAATCGNGCC GNGTAGTAAT 
    TTATTCCGAT AAAATCAAAT GAATTTTGTA ACATCATANA TNGCTCTTTG 
    GNGAAANAAG GCAACCTATT TCCAGCTGTN GTCTTAATCG TTTCAGGGTA 
    GTCTCCAAAT ACTAAAGGGC TGANATGCCT ANATNTTATT GTAAAATAAA 
    NAAAATTANA TAATAATTTT TTTTTNTAAC TTTAAATNTN GATTTAATAN 
    CNCNAAANGG NTCNTNTTTT TCACANCTTN CCANCCANTN TTGAAAACAA 
    NANCTCGTTC AACTGNTTNT TTATCAAATT CGGAATCAAT GTCATAAGGC 
    TCAAACCAAT AAGGGGACAA CACTATGCCT ATNTTAGCAT CTTGNGAAAT 
    CTGTTTTAAA AATATCATAA ATCAAAATGT TACTTTTTTG CTTTCAAATC 
    CTTTATAATA GATAAAATGA CCCGAACCAN TCCATTTTTT TTTTTGNGGG 
    GGTAAAAAAA TTTTGAAATG GAAGGNNTTT TTTTTTTTTN NGGAAACAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8392882 [Map]; Strand: w
      • AT5G24550.1 - [+] show detail - beta glucosidase 32
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: 52-0633-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGAAT TACATTTATC 
    ACTCTTTTTT AGTGACAAAT CGTAGCGGCG ACCACATCTC ATCAGAATCG 
    GTATGCACTT TTCGCACAAA TTATTATTCC TACTTTCTTT AAAAATTATT 
    AGTATATTAA ACAATGCTTA ACCATAAATA ATTTTCTTCA TTTTTCCTTC 
    ATTTTCAGGA TGGGACAAAA ATTCTCTGGT CATATCCGGA AGGCCTACGA 
    AAGCT

AT5G24550.1

Model type
Protein coding
Short Description
beta glucosidase 32
Computational Description
beta glucosidase 32 (BGLU32); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 31 (TAIR:AT5G24540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR