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52-0640-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430710 [Map]; Strand: w
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0640-1 - 5-prime edge 
    GNTATNGCTA NCTAATCTGN NGNNTATNCA TATACAATGT AAGGTATTAT 
    CTGANACTAT NNCTGAACCT ACTGTTATGT GNAAGCAGCC TACANCTATT 
    ACATGNTGNC TGCTTNTNNA CGGANCACCA NCCCGGGNCG TCGACCACNC 
    GTGACGCCTA TATACACATG TGACTATGTA AGTGTTTTTA TATACCCTTT 
    TTAAGTAATT CTGAAAAGAC AGTCTGAATG TTTGTACGAG TCATCATCTA 
    AATTCCACTG AAATTAAAAG GGAGAAACAG AAGAAGAGAG AGGTGAGTAG 
    ATGGAGGAGT AACAAGAGAA AGAAGAGAGA AAGGTGAGAA GCCATGAATA 
    GACTGATTAG GCAAGCCATG ACCCAAACAG GGTATATCAG AAGCAGTGTG 
    TAACAGATGA CGACAAGGCA GTAGCAGACG AGACTCGCCA CTTTCTCGAT 
    AGCTTCTCCC ACCGGCATCT TGATTTGCGT ATTTGCTACT CCTCTGGATT 
    ACATGACTTC ATTTAAATAA ATAGTAAGAA ACACACACAG AGTCTTTGGA 
    GAAATACATG CACAAGAAGT TGTTTCCTCT CTAAACGGGA CAATGCATCC 
    CGCATTTCAG CCCTTCCTCT GTTTCTTCTT TTTCCCCTCT GTTTTTGCAT 
    CTTCACTGTG TTTACGTAAC AGAAACGTGC TTTGTCATAA AGCTCAAGTA 
    ACAATTTCAA GANGCAAGTA TCCAATTGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430606 [Map]; Strand: w
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0640-1 - 3-prime edge 
    ACCAGGAGGG GCCTTCTTGT CGTAGGCACC AGGTGCGTAA GGGTGTGGCA 
    CCACCTCGTA AGGTACGTAA GGCCACAGCT CCGCCTTCTT CCCTGTCCGA 
    TGCATCACCC GATGCACCAC CTTGCTCGGT TGGACGAATC CCTCGACCGT 
    GAGTTTGCTC TGTTTAGGAT CGACGGTGAC TTTGCTGACT CCTTTCATGC 
    CTTCCACCGA CTTCCTCACC CGTCTCTCGC ACCCTTCGCA GTCCATCTTC 
    ACTTTTATCT CCACCTTCTT TTTTCATCAT ACGAAACACA GTCTCGTTAC 
    ACAACAGTTA CAAGCAAAAA AAAGGAATCA GATATATCAG AGAAGGGAGA 
    AGAGTGCCTG GAACTGCTTA AGCT

AT5G66110.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 6 (TAIR:AT4G38580.1); Has 1185 Blast hits to 1108 proteins in 39 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 3; Plants - 1176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR