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52-0666-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16898096 [Map]; Strand: c
      • AT5G42260.1 - [+] show detail - beta glucosidase 12
        Distance: -616; Region: promoter
    Flanking Genome Sequence: 52-0666-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACTT GCGACAAGGC GACCAAAATT TCAACATCAA 
    CGAAAGCAAT AGAAATTGTT GAGGATAAAA GAGTGTCGCT GAAAAGAAGA 
    ATGACTGTTG GAATGGTAAA AAGGTGCTGC TGCGACCTGC TTTTCACAGT 
    GTTGGCGGTG TTACTTCTCC ACATACTTTG GAGTCTCCAG TAGTTACTTA 
    TATTTTTGTG TCGCGCATCG CTGACGCTGA CGCAGCGATC ATGAAAAAAA 
    CATGACTATT GTGTACACGT TCCAGTACAC TCTCAAGCTA CAGTAAAACA 
    TAGGAACATA GAGATAAATT GATATTCTCA TAAGAACGAG GAGATTTGCT 
    TCTGAATTTT TTTTATTAAA CATTGATATA ATTTAATTAT CTTTTGATAG 
    CTTTCAAAAT ATTCTTCTTC TTTGACACTC CTTTTTTGGT AACAAAACAA 
    AGTACAAATT ACAATACCAT AAGATGAAAA AACAATTTCT TGTCCTTTGC 
    CTATTTTCAT TACAATTCAT TGACTTTTTA TTTTGCTGCC ACTTTGGCAT 
    TTGCTTGTTT TGATTACAAA CCAATAAAAA TAGTTAAACA TGAAACATAT 
    GAAATTGATG CAAAAGATGG AAAGATAAAA TAAGTCAATT CACTTAGCCC 
    ATCCATAAGA CACACCTAAT GCATTTCCCT TCAAGAAGTA GCTGGAATGC 
    GTCGTTGATC TCCTCGAATT TCATCTCATG TGTCACAA

AT5G42260.1

Model type
Protein coding
Short Description
beta glucosidase 12
Computational Description
beta glucosidase 12 (BGLU12); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR