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52-0679-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23322005 [Map]; Strand: w
      • AT3G63110.1 - [+] show detail - isopentenyltransferase 3
        Distance: -2465; Region: intergenic
      • AT3G63120.1 - [+] show detail - cyclin p1;1
        Distance: 951; Region: intergenic
    Flanking Genome Sequence: 52-0679-1 - 3-prime edge 
    ATCGTGTGCT TAAATCCTAA AGGCGCAGGC TTGGTTTTAA TTTTGAATGT 
    TAAAAGAAAT CTATTTTCGA AAACCAAAAA AAATTACTTG GAAAAAATGG 
    AATAAAAAGA AAAACATTTA GGTGGTTGGT TAGTTATTAA GGTTTTGGTT 
    TTTCTGGATT CACTAATCTA CTTACCTTTG TAGAAAATGC TTGTTTATAT 
    GAATAGAGAC GTTCGAAGTA GGCATGAAGT TTTTTGTTTG CTTAAAATTT 
    TTAATTTGAG TGAGATAAAA CCGTTAAAAG TTTATCCTAA AATTTGATAG 
    CTACGCTAAT TTTCCATATG CAAATTCTAT TTTGTCGTTA TACATAACTC 
    TTTACTTGCA ATATACAACA GCTTCCGAAA ACAAAAACAA AATCAATGAA 
    TGGCCAAATC CCAAACGATT ACTGAAAGAG AGGGATAAAA AGAAAGTTAA 
    TGCGCAAAGG AATAGGCGTG ACTGCCTTAT TGGTCGTATT ATTTACTCTT 
    TTTTTTTCAT CACACGATCG ATTATAATAT ATATATCTTC AAACGTGGGT 
    GTTGGGTTAA CATCAATCAA TCATTAAGCT

AT3G63110.1

Model type
Protein coding
Short Description
isopentenyltransferase 3
Curator Summary
Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.
Computational Description
isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63120.1

Model type
Protein coding
Short Description
cyclin p1;1
Computational Description
cyclin p1;1 (CYCP1;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 1179 Blast hits to 1177 proteins in 221 species: Archae - 0; Bacteria - 18; Metazoa - 258; Fungi - 438; Plants - 231; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Link
InterPro Scan - TAIR