1. Home
  2. Mutant Lines
  3. 52-0680-1

52-0680-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 249824 [Map]; Strand: w
      • AT4G00580.1 - [+] show detail - COP1-interacting protein-related
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 52-0680-1 - 5-prime edge 
    CTAGAATCTA CATGTTACTT GTGTACACTA GTAAGCCTTG ATTAGCTTTA 
    AATGTTGTAG ATAATCTTCT AGCTGAATTA AACCAAACTA GTGATGATGC 
    TGAGAAAGAA GGGATCATAG GTCTTGTTAA TGCTACNTTC TGAAGCTATT 
    GAAAACGGTA ACTTCAGTTC TTGGTTGTAT ATACATACTT TTTCTTCTCT 
    AGCATAATAG GCAATGGATC ATTTCTATTG AGTCGTAATT GCTGAATTTT 
    GTGTAGAAAC TGAGATGAGT GTCAAGGAAA AAGATGGTGA TGAGGAGGCT 
    AAATCTGAGA AGCCTAAAAA GAAAAAAAAA GCAAAGAAAG TCAAGACTCC 
    GGCTAAAGAA GATGGTCAAG TNGCTTCTAG CTCAAGGAAC GCTGAGGAAG 
    ATGGTGTCTC GANAGATCCG CAGGAGAATG TGGCTAAAGC TGNGAAGAAG 
    CCGAACAAGA GATCGAAGAA GGANCAGNCT TCAAACATTG NTGAGGAGGG 
    CTGCTTAAGG ATTGNGTGCT ATCCCTTATC ANGATCATTG ATCGGCTNCT 
    CTTTNANCCN CTTCCNCTTT TAGAAACTTT NGGGGNNTTG NCNTGGGGAT 
    NTCCNTNNGG TTGNGCNTTT NNGAACACTT CGANGGCNNN NTTGGTTTTT 
    NNCCGGNTGN AAACCACTNT ATTACCCTNT NGNNAAAANC ATAGCCTTGG 
    ANNTTANTTN NNANANCAAA ATATNNANAA GGANAT

AT4G00580.1

Model type
Protein coding
Short Description
COP1-interacting protein-related
Computational Description
COP1-interacting protein-related; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT2G01800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR