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Mutant Lines
52-0743-1

52-0743-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 528234 [Map]; Strand: w
- AT4G01245.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: 90; Region: intergenic
- AT4G01260.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
  Distance: 336; Region: intergenic

AACATTTGGT TAGGTGTGTG TGTGTGTAGG AGTCATCTCA AATTATTTTT 
GAAAGGTTAT CGTCTCTAAT TATAAGTAAA CTTCAAAACT AAGTGATGAG 
TTTTTGCCTC TTTCCAAAGT TATTTCCCAA TGTATTGGTT GAATAGAACA 
GAAAGTATTC TACTGAAACA TGTTTTGAAA CGCCATTCCA AGACATCAAT 
AACATAAATT ACCACTTAAC ATAAACGAAG GGGTCTTATA CCCAATCAAA 
GCATCCAACA ATAGAAGCAA ACAGAATAAT TATCTGATAG AACAAAAGTC 
TTAAGAAGCC AAACCACCGA TAAGAAACTA AAGCCGCAAA ATGCAAAAAG 
CAAACTAAAA AAGGATAAGA AAAACAAGCC AACAACAAAT CACCAGCTAG 
CCCTTTCATC TACTTACAGG AATAAGATGC GTTGTCTTGC TTAGACAGCA 
CATTCGTCAC GGCAGCAACA AATTCACTTC TCATCATAGA GAGCTCCTCT 
TCCTTAGCCT GAATCTTCTT CAAGTTTTTT TCCATCTTTC TCTTTTGTTT 
TCCATCTTTG ATCTTATCCA ATTNTGCACT CCATTTTGTG TCATCAACAC 
CCAAAGAATT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 297303 [Map]; Strand: w
  - AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
    Distance: 0; Region: intron1 (CDS)
  - AT3G01840.1 - [+] show detail - Protein kinase superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 52-0743-1 - 3-prime edge
```
NAGNGGGNNG GNGGNGGNGN GGGGNANNNA AGANAANGGG GNTNNNNNNN 
NNATTGCANG GAAGGNGCCT TGTGNNAACN GTTTCNGACC GATTGCNTCA 
NCNAGAANCA ATNANTNCAG CCTNGATACT GNNNCTNGGC GTGGAAACAG 
AGGATCAAGA TANGNNACCN ATGNCGCCAT CGCGTTAAAG TATATGCATC 
GGANCANNTA CGTCCACNGC NCCANNAANA NCNNAAACAT CTTTNTGANC 
NAAAATAACN
```

AT3G01830.2

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin like 37 (TAIR:AT5G42380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01840.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 52720 Blast hits to 52395 proteins in 2921 species: Archae - 39; Bacteria - 3156; Metazoa - 18439; Fungi - 2605; Plants - 22696; Viruses - 193; Other Eukaryotes - 5592 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01245.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G01270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01260.1

Model type: Protein coding
Short Description: DNA-binding storekeeper protein-related transcriptional regulator
Computational Description: DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G25210.1); Has 1175 Blast hits to 958 proteins in 167 species: Archae - 0; Bacteria - 77; Metazoa - 317; Fungi - 112; Plants - 260; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
Link: InterPro Scan - TAIR