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52-0751-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8125024 [Map]; Strand: c
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: -2240; Region: intergenic
      • AT5G24040.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 988; Region: intergenic
    Flanking Genome Sequence: 52-0751-1 - 5-prime edge 
    TTCNNANNGC TANATCNTTG AATATGTATG GANCNTGTAC GTGTTNAAAG 
    CAAAATAAGA TCAATTNGTC NACCATATAA TTGAAGGATA TAATAATTGA 
    ATATATCTTC AATGAGATTT GATCAGTTAC ATAATTCACN TTTTTTNATT 
    ANACCAATCT AATAGATGAT AAATTACTTT AATAGGAAAA CCTTAAATTA 
    CCTATCTACA AAACGTTTGC CGGTGTGTAT CTTATTTTTA TTACNTTTGG 
    CATTATCAAT CTGCTTTAGG TCAAACCTAA GTTTTGTCCG CTCTAAAGAC 
    AAAACTCATG TNCAGCGCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8125140 [Map]; Strand: c
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: -2356; Region: intergenic
      • AT5G24040.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 872; Region: intergenic
    Flanking Genome Sequence: 52-0751-1 - 3-prime edge 
    TTTGGGAATA TCCTCTGTAA TCGGACAAAC TAATAGCTTA ACTGGTTAAT 
    TTATTCAATA GCTTCAATAC AGAAATTAAA TAATGATAAA TACTAAATAA 
    TTGAGTATTT GATCTCAAAT GTAGGAAATC TGTGAAAGCG TTAGATGAAA 
    AGGACTTTGA ATTTATATCA GATATGTTTA TCTTAAATTT ATTAGGATAC 
    TAATAAGATG GGTATTTTGA GTTTTACAAA AACAAATTGC ATATGAAATT 
    ACTTCAGATA TTTGTTTGAA AGTTTATAAT GGTCTAATTT CGATGATATA 
    ATTTCTCATT AACCTTGTAT GGATGATGCA AGCAGAAAAA AAAAAGTANA 
    NAAAAAGGAT NTTCNTAGGG ANACAGTNTT TATTCTTCCT TCCTANCAAT 
    TTNTAANGGA GNGANCNACA AAAATAGGNG AAAAGGNGAA TAGGTTTNGA 
    TAATATNTNA ANCTGTAATA TNAATGGCCN TGGNCCCATN TGACTNGATA 
    ATTGCTGTTT NTTTTANAGT TGGGTGAGTC ACTGAGTCCT TAAAGCTGGC 
    ATCTTCTAGT TGCCGGCCCA AAAATGACCC CTCATGGCTA ATGCAATGCA 
    CCTTGAAAAT TTAGGATACA AAACAAATTG CCTAANAAAA TTCAAAAAAT 
    TCTAAATTTG CAAACAAAAG GAGAAAACAN GAACCNGGAG TTCCGGCCAA 
    AATAAAACCT TTAATTTCAN AAAAGTANAC ATTCTGCTAA

AT5G24030.1

Model type
Protein coding
Short Description
SLAC1 homologue 3
Curator Summary
Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.
Computational Description
SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24040.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G16290.1).
Link
InterPro Scan - TAIR