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52-0758-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8122201 [Map]; Strand: c
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 52-0758-1 - 5-prime edge 
    GTNNAANCNG GCNATCACAA GCNGATGGAG CATGAACNAT ATNCCGACTA 
    NACNGCGTAA ATATTCATAA GCTGNTGATN GNCGGACCGA CGNCATNACT 
    TTGANGTGGA CCCGATGAGT TGATGGGCAC ATAGCACCAC ACCNTCCATN 
    TAAGATNTTT TGCTATTGNN GGATTTTTCT NCTAAAGNTT TTTTATAGTA 
    CAGCCAAGGG GAAAGGAAAA AGAANTATAT ATATATGTAT ATANNNATGG 
    NNGTTTCTGC NGGTTNNGGG GGNGNTTGNN NGNNNNTCAA GAAANANCAG 
    GANAAAAGAG GNNTNATATA TATANACCCC NNNTGNNNTN NNAGAAATNT 
    AGNNTGGATN CGGAANACTC GTGTNNANNG NGCCNAGGTN GGGANNNGGG 
    GGGGAGNNNG GNGNCNNGNG GACNNNCAGC NCACNAANNN ANAGGNNNCN 
    GCTTNNCGCN GNTTNTAATN AGCANCAGGN NNCAGNCGNA NCTTCNAAAA 
    ANCNANANGA NCTTCNCACN CAAGCNACAG NNCGAATNNG NNCNCNGGNC 
    TCNNNCGNNG NGCACNNCGN NNGANGGTAG TGNCTNNNGG GNNCCNCGTN 
    ANANCNNANN AANNNNGCCC ANCNNCNNGG AGAAGCNGTC CNGNAGGAAN 
    GCNNNAGCGC GGCGNGCNCG NGGNNGGNNN NNNGGAANTG TNTNGNNNNA 
    GNNNTACANA NATNNNCNNG TANANNNNGA NNCCNCGNNT GNCANAGNTT 
    GTCCTGCNNT GANGNNNNNN AG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8122262 [Map]; Strand: c
      • AT5G24030.1 - [+] show detail - SLAC1 homologue 3
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 52-0758-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TTGAACATAT AAAAATCACA TACATGTACT AGTATTAGTA AACCAGGAAT 
    CTTTGTAAAT TTTACATCAC ATTGGTTCAC AGCTAAATTG GCATTTGGGG 
    TTTAGTAAGG TAATTTTTGG TTTCTGGAAT CAATTTGGGT TTAAGAAAGA 
    AAGAACGAGG AGAAAAAAAA AGAAAAGAAA AATCAATTCA TAAATTTATT 
    AGTTCGTAAT AANANCCCTA AGGTCATATA AAANAAAATC AANAATCGCA 
    TGTANCCTAT GCNTGTTCTC AANAAAGGAT TCACAAAAAT GTTGTTTGTG 
    ATGTAATGAA CTTTGTTAAC TACNAATCCA AAANCAAAAA AATGGANAAA 
    TGGAATAAAA CACTANCCTG ACNATTTTGA AATTTTGCAG CCGTANAAAT 
    CANAAATGGN GTTTAAAATC TACANATCTT CTCTTATTCT TGTANANATA 
    AAAATTGTGT TTTGGTAGGG AAAGAANCGA ANACNANTTA GGAGAAAATA 
    GAAAAAAGCG AGTTGGTTTG GGCGAAAACA AAACACGTCT TTGTACTATA 
    AATAAGTGTT CACGTAAGTA CAGTTACGGA AACATGATAG TGTATGTATT 
    TGTTAAATGT ATAGCTGTAA TTCAAAGCT

AT5G24030.1

Model type
Protein coding
Short Description
SLAC1 homologue 3
Curator Summary
Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.
Computational Description
SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR